RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 SIPA1Q96FS4 1042 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM71F1Q96KD3 344 aaPredicted RBP3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 CDH20Q9HBT6 801 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 FGF21Q9NSA1 209 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 STK36Q9NRP7 1315 aa3.86□□□□□ -1.79
RNU6-560P-201ENST00000364007 IGHV4-61A0A0C4DH41 118 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 LINC01565O15544 149 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 PLGP00747 810 aaPredicted RBP3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 IGHV4-59P01825 116 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 SAGP10523 405 aaPredicted RBP3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 TCF4P15884 667 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 CDH3P22223 829 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 TCEA1P23193 301 aaKnown RBP3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 CD27P26842 260 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 SP3Q02447 781 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 FFAR4Q5NUL3 377 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF449Q6P9G9 518 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 IL27RAQ6UWB1 636 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 MAML2Q8IZL2 1156 aaPredicted RBP3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 LGI2Q8N0V4 545 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 CCAR2Q8N163 923 aaKnown RBP3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF611Q8N823 705 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 CNBD1Q8NA66 436 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 HPSE2Q8WWQ2 592 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 FSD1Q9BTV5 496 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 OR2B2Q9GZK3 357 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 MIS12Q9H081 205 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 SHARPINQ9H0F6 387 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF696Q9H7X3 374 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 Q9H8V8 135 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 SCRT2Q9NQ03 307 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 CHCHD3Q9NX63 227 aaKnown RBP3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 P4HTMQ9NXG6 502 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 DDX43Q9NXZ2 648 aaKnown RBP3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF112Q9UJU3 913 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 STUB1Q9UNE7 303 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 GAB2Q9UQC2 676 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 TRIM17Q9Y577 477 aa3.85□□□□□ -1.79
RNU6-560P-201ENST00000364007 TRMUO75648 421 aaKnown RBP3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 HSPA4LO95757 839 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 GSRP00390 522 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 EDN1P05305 212 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 GPIP06744 558 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 QDPRP09417 244 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 FAM157CP0CG43 387 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 IGHV4-31P0DP07 118 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 FDPSP14324 419 aaKnown RBP3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 NPY4RP50391 375 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 MAZP56270 477 aaKnown RBP3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 GNB1P62873 340 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 CDR2Q01850 454 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 RRS1Q15050 365 aaKnown RBP3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 TAF13Q15543 124 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 GTDC1Q4AE62 458 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 SLC25A53Q5H9E4 307 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 ARHGEF16Q5VV41 709 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 ERN2Q76MJ5 926 aaKnown RBP3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 OR4K1Q8NGD4 311 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 OR52N5Q8NH56 324 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 LITAFQ99732 161 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 TLE6Q9H808 572 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 ZNF71Q9NQZ8 489 aaPredicted RBP3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 SPHK1Q9NYA1 384 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 POLLQ9UGP5 575 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 ANAPC5Q9UJX4 755 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 DISP3Q9P2K9 1392 aa3.84□□□□□ -1.79
RNU6-560P-201ENST00000364007 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 CASTOR2A6NHX0 329 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 C2orf81A6NN90 581 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 HHLA1C9JL84 531 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 ZNF500O60304 480 aaPredicted RBP3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 SOCS5O75159 536 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 ATP6AP2O75787 350 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 CLPTM1O96005 669 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 PAK4O96013 591 aaPredicted RBP3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 PLA2G4BP0C869 781 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 CEACAM1P13688 526 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 IRF2P14316 349 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 DARSP14868 501 aaKnown RBP3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 GNB3P16520 340 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 CA6P23280 308 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 EEF1B2P24534 225 aaKnown RBP3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 WNT5AP41221 380 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 RPL21P46778 160 aaKnown RBP3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 GLIPR1P48060 266 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 CRIP2P52943 208 aaPredicted RBP3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 GSDMDP57764 484 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 HYAL1Q12794 435 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 RBM39Q14498 530 aaKnown RBP3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 TRAT1Q6PIZ9 186 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 ADCK2Q7Z695 626 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 VSIG1Q86XK7 387 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 IQUBQ8NA54 791 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 OR2T11Q8NH01 316 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 FAM76AQ8TAV0 307 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 TMEM190Q8WZ59 177 aa3.83□□□□□ -1.8
RNU6-560P-201ENST00000364007 GIMAP5Q96F15 307 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms