RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 NFKBIAP25963 317 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 MMP12P39900 470 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 KRT6CP48668 564 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 MTPNP58546 118 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 LIPIQ6XZB0 460 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 PARS2Q7L3T8 475 aaKnown RBP22.01■■□□□ 1.11
LDB1-201ENST00000361198 RALGPS2Q86X27 583 aaPredicted RBP22.01■■□□□ 1.11
LDB1-201ENST00000361198 BPIFB1Q8TDL5 484 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 OSCP1Q8WVF1 389 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 BTN2A2Q8WVV5 523 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 ASZ1Q8WWH4 475 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 CYGBQ8WWM9 190 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 ISOC1Q96CN7 298 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 FBXL20Q96IG2 436 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 LRIG1Q96JA1 1093 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 CGREF1Q99674 301 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 C1orf109Q9NX04 203 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 NFKBIL1Q9UBC1 381 aaPredicted RBP22.01■■□□□ 1.11
LDB1-201ENST00000361198 NEUROG3Q9Y4Z2 214 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 PCDHB3Q9Y5E6 796 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 PABPN1LA6NDY0 278 aaKnown RBP22■■□□□ 1.11
LDB1-201ENST00000361198 SLC16A5O15375 505 aa22■■□□□ 1.11
LDB1-201ENST00000361198 AP2A2O94973 939 aa22■■□□□ 1.11
LDB1-201ENST00000361198 NEK2P51955 445 aa22■■□□□ 1.11
LDB1-201ENST00000361198 ZNF284Q2VY69 593 aa22■■□□□ 1.11
LDB1-201ENST00000361198 FAM174BQ3ZCQ3 159 aa22■■□□□ 1.11
LDB1-201ENST00000361198 KRTCAP2Q8N6L1 136 aa22■■□□□ 1.11
LDB1-201ENST00000361198 MCOLN3Q8TDD5 553 aa22■■□□□ 1.11
LDB1-201ENST00000361198 SELENOMQ8WWX9 145 aa22■■□□□ 1.11
LDB1-201ENST00000361198 YTHDF1Q9BYJ9 559 aaKnown RBP22■■□□□ 1.11
LDB1-201ENST00000361198 DPY30Q9C005 99 aa22■■□□□ 1.11
LDB1-201ENST00000361198 ATG10Q9H0Y0 220 aa22■■□□□ 1.11
LDB1-201ENST00000361198 PRAMEF4O60810 478 aa22■■□□□ 1.11
LDB1-201ENST00000361198 FTH1P02794 183 aa22■■□□□ 1.11
LDB1-201ENST00000361198 ELFN1P0C7U0 828 aa22■■□□□ 1.11
LDB1-201ENST00000361198 METAP1P53582 386 aa22■■□□□ 1.11
LDB1-201ENST00000361198 CTSCP53634 463 aa22■■□□□ 1.11
LDB1-201ENST00000361198 OR4D2P58180 307 aa22■■□□□ 1.11
LDB1-201ENST00000361198 PWP1Q13610 501 aa22■■□□□ 1.11
LDB1-201ENST00000361198 CACHD1Q5VU97 1274 aa22■■□□□ 1.11
LDB1-201ENST00000361198 PRAMEF9Q5VWM5 478 aa22■■□□□ 1.11
LDB1-201ENST00000361198 GPR180Q86V85 440 aa22■■□□□ 1.11
LDB1-201ENST00000361198 RIMKLAQ8IXN7 391 aa22■■□□□ 1.11
LDB1-201ENST00000361198 SLC13A3Q8WWT9 602 aa22■■□□□ 1.11
LDB1-201ENST00000361198 NXPE3Q969Y0 559 aa22■■□□□ 1.11
LDB1-201ENST00000361198 ZFYVE19Q96K21 471 aa22■■□□□ 1.11
LDB1-201ENST00000361198 ZBTB18Q99592 522 aa22■■□□□ 1.11
LDB1-201ENST00000361198 CHID1Q9BWS9 393 aa22■■□□□ 1.11
LDB1-201ENST00000361198 NPLQ9BXD5 320 aaPredicted RBP22■■□□□ 1.11
LDB1-201ENST00000361198 KCNE1BA0A087WTH5 132 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 KPNA3O00505 521 aaPredicted RBP21.99■■□□□ 1.11
LDB1-201ENST00000361198 SLCO2B1O94956 709 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 CLIC3O95833 236 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 ITPKAP23677 461 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 TTKP33981 857 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 VASPP50552 380 aaPredicted RBP21.99■■□□□ 1.11
LDB1-201ENST00000361198 NUP107P57740 925 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 ADARB1P78563 741 aaKnown RBP21.99■■□□□ 1.11
LDB1-201ENST00000361198 CTBSQ01459 385 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 GGTA1PQ4G0N0 100 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 USP39Q53GS9 565 aaKnown RBP21.99■■□□□ 1.11
LDB1-201ENST00000361198 CLVS1Q8IUQ0 354 aaPredicted RBP21.99■■□□□ 1.11
LDB1-201ENST00000361198 SMG7Q92540 1137 aaKnown RBP21.99■■□□□ 1.11
LDB1-201ENST00000361198 TIFAQ96CG3 184 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 BDH2Q9BUT1 245 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 PREBQ9HCU5 417 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 ASIC5Q9NY37 505 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 MAGEL2Q9UJ55 1249 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 PRRT4C9JH25 899 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 HOXC11O43248 304 aaPredicted RBP21.99■■□□□ 1.11
LDB1-201ENST00000361198 TSPAN6O43657 245 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 AP1S2P56377 157 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 ST8SIA6P61647 398 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 ACOX1Q15067 660 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 SPANXN4Q5MJ08 99 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 TMC5Q6UXY8 1006 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 NEK10Q6ZWH5 1172 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 UBE2Q1Q7Z7E8 422 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 ADGRD2Q7Z7M1 963 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 RAVER1Q8IY67 606 aaKnown RBP21.99■■□□□ 1.11
LDB1-201ENST00000361198 RASGEF1AQ8N9B8 481 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 ST13P5Q8NFI4 369 aaPredicted RBP21.99■■□□□ 1.11
LDB1-201ENST00000361198 CLHC1Q8NHS4 586 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 GTF2H4Q92759 462 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 GLYATL1Q969I3 302 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 ELOVL6Q9H5J4 265 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 RAD18Q9NS91 495 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 VAPAQ9P0L0 249 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 CDH7Q9ULB5 785 aa21.99■■□□□ 1.11
LDB1-201ENST00000361198 H0YAE9 185 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 SEC24DO94855 1032 aaPredicted RBP21.98■■□□□ 1.11
LDB1-201ENST00000361198 PRSS23O95084 383 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 ADH1CP00326 375 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 BCKDHAP12694 445 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 EN2P19622 333 aaPredicted RBP21.98■■□□□ 1.11
LDB1-201ENST00000361198 PYCR3Q53H96 274 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 GLYATQ6IB77 296 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 RASGRP3Q8IV61 690 aa21.98■■□□□ 1.11
LDB1-201ENST00000361198 LILRA3Q8N6C8 439 aaPredicted RBP21.98■■□□□ 1.11
LDB1-201ENST00000361198 L3MBTL4Q8NA19 623 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms