RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 RNF175Q8N4F7 328 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 C1orf52Q8N6N3 182 aaKnown RBP10.9□□□□□ -0.66
SSU72-202ENST00000359060 SLC29A3Q9BZD2 475 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 PDP1Q9P0J1 537 aaPredicted RBP10.9□□□□□ -0.66
SSU72-202ENST00000359060 PCDHB3Q9Y5E6 796 aa10.9□□□□□ -0.66
SSU72-202ENST00000359060 FXYD1O00168 92 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 LSM1O15116 133 aaKnown RBP10.9□□□□□ -0.67
SSU72-202ENST00000359060 LATS1O95835 1130 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 NPPAP01160 153 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 HLA-EP13747 358 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 ENGP17813 658 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 CCR7P32248 378 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 SPINT3P49223 89 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 VEGFBP49765 207 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 CAPN13Q6MZZ7 669 aaPredicted RBP10.9□□□□□ -0.67
SSU72-202ENST00000359060 CES5AQ6NT32 575 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 TRAF7Q6Q0C0 670 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 AGTRAPQ6RW13 159 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 LRRC70Q7Z2Q7 622 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 HS3ST5Q8IZT8 346 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 SETD9Q8NE22 299 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 DDHD1Q8NEL9 900 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 OR4A15Q8NGL6 344 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 SLCO4A1Q96BD0 722 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 TCEAL4Q96EI5 215 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 TOR3AQ9H497 397 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 AASDHPPTQ9NRN7 309 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 AGPAT4Q9NRZ5 378 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 COQ6Q9Y2Z9 468 aa10.9□□□□□ -0.67
SSU72-202ENST00000359060 RALGAPA2Q2PPJ7 1873 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 TTC34A8MYJ7 566 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 TSPAN6O43657 245 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 RASAL1O95294 804 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 EPORP19235 508 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 ATP1A4Q13733 1029 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 PAGE2BQ5JRK9 111 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 PDE12Q6L8Q7 609 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 BRAT1Q6PJG6 821 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 TMC5Q6UXY8 1006 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 THOC6Q86W42 341 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 PHYKPLQ8IUZ5 450 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 OR52J3Q8NH60 311 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 EGLN2Q96KS0 407 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 APOL4Q9BPW4 351 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 ZDHHC4Q9NPG8 344 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 TRPS1Q9UHF7 1281 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 PCDHA9Q9Y5H5 950 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 BCKDKO14874 412 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 ZSCAN9O15535 394 aaPredicted RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 TSPAN12O95859 305 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 FGBP02675 491 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 CBSLP0DN79 551 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 CCNA2P20248 432 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 CBSP35520 551 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 HNMTP50135 292 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 AP1S2P56377 157 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 USP39Q53GS9 565 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 CHERPQ8IWX8 916 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 ZNF540Q8NDQ6 660 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 OR7A2PQ8NGA2 310 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 ZFAND2BQ8WV99 257 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 REPS1Q96D71 796 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 CERS4Q9HA82 394 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 CACYBPQ9HB71 228 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 KRT84Q9NSB2 600 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 DUS2Q9NX74 493 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 ELOVL2Q9NXB9 296 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 DEC1Q9P2X7 70 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 PTBP2Q9UKA9 531 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 CCL26Q9Y258 94 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 TPRKBQ9Y3C4 175 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 DNAH12Q6ZR08 3092 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 MIA3Q5JRA6 1907 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 CARNS1A5YM72 827 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 PDZK1P1A8MUH7 402 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 AXIN1O15169 862 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 SUV39H1O43463 412 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 TGFB1P01137 390 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 HSMCR30P0CW71 290 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 PRPS1L1P21108 318 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 VIPR1P32241 457 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 ALDH3A2P51648 485 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 LSAMPQ13449 338 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 SF1Q15637 639 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 LDLRAP1Q5SW96 308 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 NOXRED1Q6NXP6 359 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 MACC1Q6ZN28 852 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 HIPK1Q86Z02 1210 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 RAB42Q8N4Z0 105 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 TMCO5AQ8N6Q1 288 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 PDPRQ8NCN5 879 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 STON2Q8WXE9 905 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 SMG7Q92540 1137 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 MYOCQ99972 504 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 DUSP26Q9BV47 211 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 HERC2P3Q9BVR0 1158 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 MTIF3Q9H2K0 278 aaKnown RBP10.89□□□□□ -0.67
SSU72-202ENST00000359060 IGFLR1Q9H665 355 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 RAD18Q9NS91 495 aa10.89□□□□□ -0.67
SSU72-202ENST00000359060 TRPC4Q9UBN4 977 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms