RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 MPP2Q14168 576 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 PFKFB4Q16877 469 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 CCDC153Q494R4 210 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 TMPRSS9Q7Z410 1059 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 OOSP2Q86WS3 158 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 HMGCLL1Q8TB92 370 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 PHF21BQ96EK2 531 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 FAM111AQ96PZ2 611 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 NUDT22Q9BRQ3 303 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 TMEM79Q9BSE2 394 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 TWSG1Q9GZX9 223 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 SYNDIG1Q9H7V2 258 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 SSU72Q9NP77 194 aaKnown RBP14.38□□□□□ -0.11
CCNE1-202ENST00000357943 KCNK9Q9NPC2 374 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 MED4Q9NPJ6 270 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 ABCF3Q9NUQ8 709 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 PTBP2Q9UKA9 531 aaKnown RBP14.38□□□□□ -0.11
CCNE1-202ENST00000357943 ATXN7L1Q9ULK2 861 aaPredicted RBP14.38□□□□□ -0.11
CCNE1-202ENST00000357943 ANKRD12Q6UB98 2062 aa14.38□□□□□ -0.11
CCNE1-202ENST00000357943 PIPSLA2A3N6 862 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 GSAPA4D1B5 854 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ZW10O43264 779 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 DUX1O43812 170 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 RFPL3O75679 317 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 CEACAM1P13688 526 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 GFAPP14136 432 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 HSD17B2P37059 387 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 GDF5P43026 501 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 AGTR2P50052 363 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 GFERP55789 205 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 TBPL1P62380 186 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 PTCHD3Q3KNS1 767 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 SULT1C3Q6IMI6 304 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 KLHL35Q6PF15 583 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 SLCO6A1Q86UG4 719 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 FBXO39Q8N4B4 442 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 CCDC63Q8NA47 563 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ARMC2Q8NEN0 867 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ATL1Q8WXF7 558 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 MED8Q96G25 268 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ACAT2Q9BWD1 397 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ABCG4Q9H172 646 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 EPB41L1Q9H4G0 881 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 INTS7Q9NVH2 962 aaKnown RBP14.37□□□□□ -0.11
CCNE1-202ENST00000357943 WWOXQ9NZC7 414 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 TMEM9Q9P0T7 183 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ASB1Q9Y576 335 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 PIEZO1Q92508 2521 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ZNF839A8K0R7 811 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 A8MT66 165 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 G3V2L1 256 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 NTN3O00634 580 aaPredicted RBP14.37□□□□□ -0.11
CCNE1-202ENST00000357943 CAPN5O15484 640 aaPredicted RBP14.37□□□□□ -0.11
CCNE1-202ENST00000357943 PRPF4O43172 522 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCNE1-202ENST00000357943 PRICKLE3O43900 615 aaPredicted RBP14.37□□□□□ -0.11
CCNE1-202ENST00000357943 KLK8O60259 260 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 S100BP04271 92 aaPredicted RBP14.37□□□□□ -0.11
CCNE1-202ENST00000357943 HOXB3P14651 431 aaPredicted RBP14.37□□□□□ -0.11
CCNE1-202ENST00000357943 MPSTP25325 297 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 PSMB5P28074 263 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 HSPA7P48741 367 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 NOVA1P51513 510 aaKnown RBP14.37□□□□□ -0.11
CCNE1-202ENST00000357943 SIM1P81133 766 aaPredicted RBP14.37□□□□□ -0.11
CCNE1-202ENST00000357943 PRKAA1Q13131 559 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ILKQ13418 452 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 CDKL4Q5MAI5 379 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 IRGCQ6NXR0 463 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 FAM20CQ8IXL6 584 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 OR56A3Q8NH54 315 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 FLVCR1-AS1Q8TAF5 88 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 SMPDL3AQ92484 453 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 PKNOX2Q96KN3 472 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 PPM1MQ96MI6 270 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 TGM7Q96PF1 710 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ZMYND15Q9H091 742 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ACTR10Q9NZ32 417 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 PCDHGA1Q9Y5H4 931 aa14.37□□□□□ -0.11
CCNE1-202ENST00000357943 ASPMQ8IZT6 3477 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 TMEM120BA0PK00 339 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 LRRC14BA6NHZ5 514 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 ISM1B1AKI9 464 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 HMGB1P1B2RPK0 211 aaPredicted RBP14.36□□□□□ -0.11
CCNE1-202ENST00000357943 DLX3O60479 287 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 SMIM24O75264 130 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 SIX3O95343 332 aaPredicted RBP14.36□□□□□ -0.11
CCNE1-202ENST00000357943 CPNE6O95741 557 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 FTH1P19P0C7X4 201 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 PRDX3P30048 256 aaKnown RBP14.36□□□□□ -0.11
CCNE1-202ENST00000357943 GGT5P36269 586 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 ETV4P43268 484 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 SLC6A12P48065 614 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 YBX1P67809 324 aaKnown RBP14.36□□□□□ -0.11
CCNE1-202ENST00000357943 SQSTM1Q13501 440 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 HSP90B2PQ58FF3 399 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 ARMC6Q6NXE6 501 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 ZNF574Q6ZN55 896 aaPredicted RBP14.36□□□□□ -0.11
CCNE1-202ENST00000357943 TCAIMQ8N3R3 496 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 PTGR2Q8N8N7 351 aaPredicted RBP14.36□□□□□ -0.11
CCNE1-202ENST00000357943 OR2A1Q8NGT9 310 aa14.36□□□□□ -0.11
CCNE1-202ENST00000357943 OR2A14Q96R47 310 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms