RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 GRXCR2A6NFK2 248 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 PDZK1P1A8MUH7 402 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 PRKRAO75569 313 aaKnown RBP13.48□□□□□ -0.25
LSS-201ENST00000356396 FGF19O95750 216 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 ALPPL2P10696 532 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 C1orf61Q13536 156 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 LAPTM5Q13571 262 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 SQLEQ14534 574 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 PGM2L1Q6PCE3 622 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 CBARPQ8N350 705 aaPredicted RBP13.48□□□□□ -0.25
LSS-201ENST00000356396 LEMD2Q8NC56 503 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 MCOLN3Q8TDD5 553 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 CSGALNACT1Q8TDX6 532 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 PKP2Q99959 881 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 ZSCAN5AQ9BUG6 496 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 DCLRE1BQ9H816 532 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 POPDC3Q9HBV1 291 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 VAPAQ9P0L0 249 aa13.48□□□□□ -0.25
LSS-201ENST00000356396 PLXND1Q9Y4D7 1925 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CCDC154A6NI56 674 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 STK25O00506 426 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 SLC22A3O75751 556 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CLIC3O95833 236 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 ITGB7P26010 798 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 AQP1P29972 269 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 SLC26A3P40879 764 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 KIR2DL1P43626 348 aaPredicted RBP13.47□□□□□ -0.25
LSS-201ENST00000356396 IST1P53990 364 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 TBPL1P62380 186 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 MTX3Q5HYI7 312 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 SLC15A3Q8IY34 581 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CLECL1Q8IZS7 167 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 TRAM1L1Q8N609 369 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 FAM86B1Q8N7N1 296 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CANT1Q8WVQ1 401 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 PDXPQ96GD0 296 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 ABCG4Q9H172 646 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 TCEAL2Q9H3H9 227 aaPredicted RBP13.47□□□□□ -0.25
LSS-201ENST00000356396 CD207Q9UJ71 328 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CROTQ9UKG9 612 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CORO1CQ9ULV4 474 aaPredicted RBP13.47□□□□□ -0.25
LSS-201ENST00000356396 SNX13Q9Y5W8 968 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 MTCH2Q9Y6C9 303 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 MANBAO00462 879 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 C9P02748 559 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 MYCLP1P12525 358 aaPredicted RBP13.47□□□□□ -0.25
LSS-201ENST00000356396 GNPDA1P46926 289 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 POLR2JP52435 117 aaKnown RBP13.47□□□□□ -0.25
LSS-201ENST00000356396 OR4D2P58180 307 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 HKDC1Q2TB90 917 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 OR4F3Q6IEY1 312 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 PDPRQ8NCN5 879 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 MIEF2Q96C03 454 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 DPH2Q9BQC3 489 aaPredicted RBP13.47□□□□□ -0.25
LSS-201ENST00000356396 CCDC28BQ9BUN5 200 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 DPP7Q9UHL4 492 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 HEATR5BQ9P2D3 2071 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 A0A1W2PQF6 199 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 SAC3D1A6NKF1 404 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 SLCO1B7G3V0H7 640 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 H3BNX3 289 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 ARNTLO00327 626 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 YY2O15391 372 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 KLK8O60259 260 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 MAGEC1O60732 1142 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CLDN9O95484 217 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CPSF4O95639 269 aaKnown RBP13.47□□□□□ -0.25
LSS-201ENST00000356396 MLYCDO95822 493 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 OTCP00480 354 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CELA2BP08218 269 aaPredicted RBP13.47□□□□□ -0.25
LSS-201ENST00000356396 RPS3P23396 243 aaKnown RBP eCLIP13.47□□□□□ -0.251e-14■□□□□ 10.1
LSS-201ENST00000356396 KCNK10P57789 538 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 ANGPTL8Q6UXH0 198 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 OLIG3Q7RTU3 272 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 DDHD1Q8NEL9 900 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 OR4K1Q8NGD4 311 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 ZNF382Q96SR6 550 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 CCM2Q9BSQ5 444 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 S100A14Q9HCY8 104 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 TAC3Q9UHF0 121 aa13.47□□□□□ -0.25
LSS-201ENST00000356396 DMXL1Q9Y485 3027 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 IGLV3-16A0A075B6K0 115 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 H7BY64 318 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 STX16O14662 325 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 SRPRAP08240 638 aaKnown RBP13.46□□□□□ -0.25
LSS-201ENST00000356396 FGF4P08620 206 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 GRIA2P42262 883 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 RAP1GDS1P52306 607 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 CDK3Q00526 305 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 SLC34A1Q06495 639 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 UAP1L1Q3KQV9 507 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 C6orf163Q5TEZ5 329 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 METTL21CQ5VZV1 264 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 PRAP1Q96NZ9 151 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 CIB1Q99828 191 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 SLC2A11Q9BYW1 496 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 SLC32A1Q9H598 525 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 RETREG1Q9H6L5 497 aa13.46□□□□□ -0.25
LSS-201ENST00000356396 SCHIP1Q9P0W5 487 aaPredicted RBP13.46□□□□□ -0.25
LSS-201ENST00000356396 STK39Q9UEW8 545 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms