RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 hCG_2039718K7EN88 272 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TREHO43280 583 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 CLEC3AO75596 197 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 DNAJA1P31689 397 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 CTSOP43234 321 aaPredicted RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 CEBPGP53567 150 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TAS2R43P59537 309 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TUBA4AP68366 448 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 BTN3A2P78410 334 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 MVKQ03426 396 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 RAB30Q15771 203 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 EIF2S3LQ2VIR3 472 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 ARSHQ5FYA8 562 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 LRIF1Q5T3J3 769 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PPP2R2DQ66LE6 453 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 SMARCD3Q6STE5 483 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 GDPD4Q6W3E5 623 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 LBX2Q6XYB7 198 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ZNF627Q7L945 461 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 RASGRP3Q8IV61 690 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ZNF676Q8N7Q3 588 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PLA2G15Q8NCC3 412 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 OR56A1Q8NGH5 318 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ALG3Q92685 438 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PURBQ96QR8 312 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 OR2AG1Q9H205 316 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 OR51V1Q9H2C8 321 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PNO1Q9NRX1 252 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 KLF15Q9UIH9 416 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PRKAB1Q9Y478 270 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 C5orf51A6NDU8 294 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 RCCD1A6NED2 376 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PEX12O00623 359 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 SCGB2A1O75556 95 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 FSHRP23945 695 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 VIPR1P32241 457 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 MAZP56270 477 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 NFKB2Q00653 900 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PLEKHG6Q3KR16 790 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 C4orf46Q504U0 113 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TOR1AIP1Q5JTV8 583 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PRAMEF14Q5SWL7 426 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PRAMEF13Q5VWM6 474 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ZNF227Q86WZ6 799 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 CERS5Q8N5B7 392 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 NIPA2Q8N8Q9 360 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 OR2L8Q8NGY9 312 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TOP1MTQ969P6 601 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 MOAP1Q96BY2 351 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PPP1R14BQ96C90 147 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PTPN18Q99952 460 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 MAPKAP1Q9BPZ7 522 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 NDC1Q9BTX1 674 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 SLC6A15Q9H2J7 730 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 C14orf166Q9Y224 244 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 PCDHGC4Q9Y5F7 938 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 SNX10Q9Y5X0 201 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 BTBD19C9JJ37 291 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ARL6IP5O75915 188 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 CSTBP04080 98 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 IMPDH1P20839 514 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 GRK5P34947 590 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 RFC2P35250 354 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ACTR1BP42025 376 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ADGRE1Q14246 886 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 GFOD2Q3B7J2 385 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PRPF38BQ5VTL8 546 aaKnown RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 SLC9B2Q86UD5 537 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 LRRTM4Q86VH4 590 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 GHDCQ8N2G8 530 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 OR10G2Q8NGC3 310 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 LRTOMTQ8WZ04 291 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PSMG2Q969U7 264 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 Q9N2J8 555 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 GIN1Q9NXP7 522 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 FLRT1Q9NZU1 646 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ZIM2Q9NZV7 527 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 DGKBQ9Y6T7 804 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TLR4O00206 839 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 PSMD9O00233 223 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 MATN2O00339 956 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 VEGFDO43915 354 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 RAB36O95755 333 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 SNHG28P0DPA3 235 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 EPCAMP16422 314 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 STOMP27105 288 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 SMSP52788 366 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 LILRA4P59901 499 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 CRHR2Q13324 411 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 ARFRP1Q13795 201 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 KCNC3Q14003 757 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 DECR1Q16698 335 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 FAM174BQ3ZCQ3 159 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 CCSAPQ6IQ19 270 aaPredicted RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 ZNF782Q6ZMW2 699 aaPredicted RBP6.33□□□□□ -1.4
UPF2-201ENST00000356352 RNF19BQ6ZMZ0 732 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 HFE2Q6ZVN8 426 aa6.33□□□□□ -1.4
UPF2-201ENST00000356352 TMCO2Q7Z6W1 182 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms