RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 TMC8Q8IU68 726 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 PIH1D2Q8WWB5 315 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 NCSTNQ92542 709 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 RNF11Q9Y3C5 154 aa14.55□□□□□ -0.08
COL17A1-201ENST00000353479 IFNGP01579 166 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 SIM2Q14190 667 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 DGUOKQ16854 277 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 SPIN4Q56A73 249 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 TOR1AIP1Q5JTV8 583 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 TIFABQ6ZNK6 161 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 RASGRP3Q8IV61 690 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 SLC5A11Q8WWX8 675 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 DTNBP1Q96EV8 351 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 MPP4Q96JB8 637 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 COL22A1Q8NFW1 1626 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 A0A1W2PQU0 124 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 A8MUA0 341 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 MANBAO00462 879 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 PGM3O95394 542 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 CHRM1P11229 460 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 SLC26A3P40879 764 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 SP140Q13342 867 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 LACTB2Q53H82 288 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 HIPK1Q86Z02 1210 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 TRAM1L1Q8N609 369 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 FIBINQ8TAL6 211 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 PRDM8Q9NQV8 689 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 PCDHB11Q9Y5F2 797 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 TULP3O75386 442 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 PTX3P26022 381 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 CCR10P46092 362 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 PRRT3Q5FWE3 981 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 PDZK1Q5T2W1 519 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 MAST2Q6P0Q8 1798 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 KBTBD6Q86V97 674 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 PLD6Q8N2A8 252 aaKnown RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 FAM110BQ8TC76 370 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 YIPF4Q9BSR8 244 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 GPR174Q9BXC1 333 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 ZCCHC3Q9NUD5 404 aaKnown RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 SNX7Q9UNH6 387 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 TPST2O60704 377 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 EN2P19622 333 aaPredicted RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 IGFBP5P24593 272 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 ACRV1P26436 265 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 RPL6Q02878 288 aaKnown RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 DCST1Q5T197 706 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 NSMCE3Q96MG7 304 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 KCNA7Q96RP8 456 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 SLC29A3Q9BZD2 475 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 RC3H2Q9HBD1 1191 aaKnown RBP14.54□□□□□ -0.08
COL17A1-201ENST00000353479 PNPLA3Q9NST1 481 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 PTGFRNQ9P2B2 879 aa14.54□□□□□ -0.08
COL17A1-201ENST00000353479 SERPINA1P01009 418 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 IL7RP16871 459 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 ITGA1P56199 1179 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 GSCP56915 257 aaPredicted RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 INAVAQ3KP66 663 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 ACSBG2Q5FVE4 666 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 PLEKHS1Q5SXH7 462 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 NCEH1Q6PIU2 408 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 AVL9Q8NBF6 648 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 SETD7Q8WTS6 366 aaKnown RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 RASSF5Q8WWW0 418 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 CRISPLD1Q9H336 500 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 ZDHHC7Q9NXF8 308 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 TESMINQ9Y4I5 508 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 IGLON5A6NGN9 336 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 SEC24AO95486 1093 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 CSNK2A2P19784 350 aaPredicted RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 CCNA2P20248 432 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 PTPN5P54829 565 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 CDH12P55289 794 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 TRIM25Q14258 630 aaKnown RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 PEX5LQ8IYB4 626 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 KLHDC9Q8NEP7 349 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 ZNF354BQ96LW1 612 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 SH3GL3Q99963 347 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 CADM1Q9BY67 442 aaKnown RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 CD244Q9BZW8 370 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 RASSF1Q9NS23 344 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 ACTL7AQ9Y615 435 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 TNRC6CQ9HCJ0 1690 aaKnown RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 CAPN8A6NHC0 703 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 H3BQ06 376 aaPredicted RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 LDB2O43679 373 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 STX11O75558 287 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 MED26O95402 600 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 RANBP1P43487 201 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 SEPHS1P49903 392 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 RAB8AP61006 207 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 LSM3P62310 102 aaKnown RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 PCLAFQ15004 111 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 TRIQKQ629K1 86 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 TMIGD1Q6UXZ0 262 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 OR5AK3PQ8NH89 298 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 PGAP3Q96FM1 320 aaPredicted RBP14.53□□□□□ -0.08
COL17A1-201ENST00000353479 CDC14AQ9UNH5 594 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 DHRS7Q9Y394 339 aa14.53□□□□□ -0.08
COL17A1-201ENST00000353479 FAM86C2PA6NEL3 165 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms