RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TRIM23P36406 574 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ARL1P40616 181 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 HNF4AP41235 474 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 BDKRB1P46663 353 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 SOX9P48436 509 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 HNRNPFP52597 415 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 CLDN8P56748 225 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 RPL38P63173 70 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 YBX1P67809 324 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 CDK3Q00526 305 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 RHDQ02161 417 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 BNIP2Q12982 314 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 CSTF3Q12996 717 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 RPA4Q13156 261 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 CHIT1Q13231 466 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 NAE1Q13564 534 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 GTF2H3Q13889 308 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 NFYCQ13952 458 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 FGL2Q14314 439 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 CPSF6Q16630 551 aaKnown RBP eCLIP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 OGFRL1Q5TC84 451 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 FRG2Q64ET8 278 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ZNF776Q68DI1 518 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 GRHL2Q6ISB3 625 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 LCN8Q6JVE9 175 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 SUSD1Q6UWL2 747 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 UNC5DQ6UXZ4 953 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 SLCO4C1Q6ZQN7 724 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ARPINQ7Z6K5 226 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 PTRH1Q86Y79 214 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 TICAM1Q8IUC6 712 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 HID1Q8IV36 788 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 KIAA2013Q8IYS2 634 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 OXR1Q8N573 874 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ZNF513Q8N8E2 541 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 PLA2G15Q8NCC3 412 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 GLB1L3Q8NCI6 653 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 PPFIBP2Q8ND30 876 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 FAM156AQ8NDB6 213 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 HIPK4Q8NE63 616 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 OR2T3Q8NH03 318 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 SELENOMQ8WWX9 145 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 FOXJ1Q92949 421 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 VPS33AQ96AX1 596 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 PYCR2Q96C36 320 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 C11orf24Q96F05 449 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 METTL2AQ96IZ6 378 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 FOPNLQ96NB1 174 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 FRG2BQ96QU4 278 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 SGPP1Q9BX95 441 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 C1QTNF2Q9BXJ5 285 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 TEX101Q9BY14 249 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ZDHHC5Q9C0B5 715 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ATG10Q9H0Y0 220 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 PCDHAC1Q9H158 963 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 OR52A5Q9H2C5 316 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 MUC13Q9H3R2 512 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 CLMPQ9H6B4 373 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 FBRSQ9HAH7 460 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ZDHHC4Q9NPG8 344 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 TRPV5Q9NQA5 729 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 INTS7Q9NVH2 962 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 GMPR2Q9P2T1 348 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 SERGEFQ9UGK8 458 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ZNHIT2Q9UHR6 403 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 ZFR2Q9UPR6 939 aaKnown RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 TMED5Q9Y3A6 229 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 POLR3HQ9Y535 204 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 PCYT1BQ9Y5K3 369 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-203ENST00000350034 DENND4AQ7Z401 1863 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 DOCK8Q8NF50 2099 aa6.72□□□□□ -1.33
TRIM55-203ENST00000350034 SPTBN4Q9H254 2564 aa6.71□□□□□ -1.33
TRIM55-203ENST00000350034 GPR179Q6PRD1 2367 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TRBV5-3A0A0A0MS03 114 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 KLHL33A6NCF5 533 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 PRR19A6NJB7 356 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 AQP12BA6NM10 295 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 GPR89AB7ZAQ6 455 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 RNASEH1O60930 286 aaKnown RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SEC22BO75396 215 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SLC16A8O95907 504 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 IL6P05231 212 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 GPR89BP0CG08 455 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 ERGP11308 486 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 HSD3B1P14060 373 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 HOXB9P17482 250 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 AMD1P17707 334 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 TCN1P20061 433 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 POU3F3P20264 500 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 HSD3B2P26439 372 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 PBLDP30039 288 aaPredicted RBP6.71□□□□□ -1.34
TRIM55-203ENST00000350034 SLC7A1P30825 629 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 NTSR1P30989 418 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 CTHP32929 405 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 WASP42768 502 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 GSK3BP49841 420 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 NEK2P51955 445 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 PNLIPRP1P54315 467 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 C21orf58P58505 322 aa6.71□□□□□ -1.34
TRIM55-203ENST00000350034 MRPS22P82650 360 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms