RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 KRT34O76011 436 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 JUPP14923 745 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 RPS9P46781 194 aaKnown RBP18.11■□□□□ 0.49
PTN-201ENST00000348225 PCDH1Q08174 1060 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 PTK2BQ14289 1009 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 FASTKQ14296 549 aaKnown RBP18.11■□□□□ 0.49
PTN-201ENST00000348225 NR6A1Q15406 480 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 IMPG1Q17R60 797 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 XKR6Q5GH73 641 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 Q6ZSR6 202 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 TRIM46Q7Z4K8 759 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 SNX32Q86XE0 403 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 MIER2Q8N344 545 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 FAM174AQ8TBP5 190 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 SGPP1Q9BX95 441 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 GIMAP2Q9UG22 337 aa18.11■□□□□ 0.49
PTN-201ENST00000348225 E7EQ34 232 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 PI15O43692 258 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 NDUFS2O75306 463 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 WFS1O76024 890 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 HNF4AP41235 474 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 ACADVLP49748 655 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 ZNF33BQ06732 778 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 RPS6KA2Q15349 733 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 Q6ZSR9 355 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 ARHGAP24Q8N264 748 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 CAMKK1Q8N5S9 505 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 FNDC5Q8NAU1 212 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 RBM15BQ8NDT2 890 aaKnown RBP18.1■□□□□ 0.49
PTN-201ENST00000348225 MCUR1Q96AQ8 359 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 OR4K3Q96R72 315 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 FERD3LQ96RJ6 166 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 INSM2Q96T92 566 aaPredicted RBP18.1■□□□□ 0.49
PTN-201ENST00000348225 RTKNQ9BST9 563 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 WDR37Q9Y2I8 494 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.1■□□□□ 0.49
PTN-201ENST00000348225 PLEKHM1Q9Y4G2 1056 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 HEBP2Q9Y5Z4 205 aa18.1■□□□□ 0.49
PTN-201ENST00000348225 CFAP20Q9Y6A4 193 aaKnown RBP18.1■□□□□ 0.49
PTN-201ENST00000348225 E7ENX8 843 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 LSM1O15116 133 aaKnown RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 ERGP11308 486 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 MAGEA9P43362 315 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 SRP54P61011 504 aaKnown RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 TAP2Q03519 686 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 MAD2L1Q13257 205 aaPredicted RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 CUL3Q13618 768 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 TSTA3Q13630 321 aaPredicted RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 KRT33BQ14525 404 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 SMU1Q2TAY7 513 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 UAP1L1Q3KQV9 507 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 AGKQ53H12 422 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 C6orf136Q5SQH8 315 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 GRHL2Q6ISB3 625 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 LONP2Q86WA8 852 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 SFRP1Q8N474 314 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 SETD7Q8WTS6 366 aaKnown RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 SELENOMQ8WWX9 145 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 RLN3Q8WXF3 142 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 HBEGFQ99075 208 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 IER2Q9BTL4 223 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 PCED1AQ9H1Q7 454 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 IMP3Q9NV31 184 aaKnown RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 AIG1Q9NVV5 245 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 A0A1W2PPC4 97 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 KDM1AO60341 852 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 KRT16P08779 473 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 CASP2P42575 452 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 MRPL19P49406 292 aaKnown RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 CTBSQ01459 385 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 EMX2Q04743 252 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 GRIK2Q13002 908 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 PRKG2Q13237 762 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 DOC2AQ14183 400 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 SGO1Q5FBB7 561 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 TPRG1LQ5T0D9 272 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 THEMIS2Q5TEJ8 643 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 LPCAT2Q7L5N7 544 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 RD3Q7Z3Z2 195 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 LRRC56Q8IYG6 542 aaPredicted RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 RGL4Q8IZJ4 473 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 OR13H1Q8NG92 308 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 SNX19Q92543 992 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 TSACCQ96A04 125 aaPredicted RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 HAUS8Q9BT25 410 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 RAB11FIP5Q9BXF6 653 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 MVB12BQ9H7P6 319 aa18.09■□□□□ 0.49
PTN-201ENST00000348225 SDR39U1Q9NRG7 319 aaPredicted RBP18.09■□□□□ 0.49
PTN-201ENST00000348225 SERTM1A2A2V5 107 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 MEI4A8MW99 385 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 GSC2O15499 205 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 PRAMEF4O60810 478 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 RASGRP1O95267 797 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 PDYNP01213 254 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 GPX3P22352 226 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 STX5Q13190 355 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 CYP2A13Q16696 494 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 AP5B1Q2VPB7 878 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 PRAMEF14Q5SWL7 426 aa18.08■□□□□ 0.48
PTN-201ENST00000348225 PRAMEF9Q5VWM5 478 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms