RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 NDST3O95803 873 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 RPIAP49247 311 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 OAZ1P54368 228 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 NCEH1Q6PIU2 408 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF367Q7RTV3 350 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 TMPRSS11BQ86T26 416 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ARMC10Q8N2F6 343 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 C1orf127Q8N9H9 656 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 GOLM1Q8NBJ4 401 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 TMEM80Q96HE8 168 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 C12orf66Q96MD2 445 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ATG10Q9H0Y0 220 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 CST11Q9H112 138 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 TRPV4Q9HBA0 871 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ABCB8Q9NUT2 735 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 MS4A12Q9NXJ0 267 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 KCTD5Q9NXV2 234 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 PCDHGB6Q9Y5F9 930 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 CD247P20963 164 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 NAE1Q13564 534 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF598Q86UK7 904 aaKnown RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 CHERPQ8IWX8 916 aaKnown RBP11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ALDH16A1Q8IZ83 802 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 GALNT11Q8NCW6 608 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 OR6C4Q8NGE1 309 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 HSH2DQ96JZ2 352 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 SLC29A1Q99808 456 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 MAPKAP1Q9BPZ7 522 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 B3GNT3Q9Y2A9 372 aa11.85□□□□□ -0.51
COL12A1-202ENST00000345356 ANXA2P2A6NMY6 339 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 PDCD5O14737 125 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 NFAT5O94916 1531 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 PAPSS2O95340 614 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 ANXA2P07355 339 aaKnown RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 BMP2P12643 396 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF14P17017 642 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 LHCGRP22888 699 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 CHRNA4P43681 627 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 RGS8P57771 180 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 MS4A2Q01362 244 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 GK3PQ14409 553 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 NANOGP8Q6NSW7 305 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 CMTR2Q8IYT2 770 aaKnown RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 GAL3ST1Q99999 423 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 DUSP26Q9BV47 211 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 FTHL17Q9BXU8 183 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 OXCT2Q9BYC2 517 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 NANOGQ9H9S0 305 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 CPA4Q9UI42 421 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 SNX10Q9Y5X0 201 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 ALDOAP04075 364 aaKnown RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 GGT5P36269 586 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 TCEAL1Q15170 157 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 CRB2Q5IJ48 1285 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 CES5AQ6NT32 575 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 FAM117BQ6P1L5 589 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 C2orf69Q8N8R5 385 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 SNAPC3Q92966 411 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 C2orf49Q9BVC5 232 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 SPATC1LQ9H0A9 340 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 MKS1Q9NXB0 559 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 NUFIP1Q9UHK0 495 aaKnown RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 PTCH2Q9Y6C5 1203 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 AQP9O43315 295 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 CHP2O43745 196 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 IL32P24001 234 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 RIPPLY1Q0D2K3 151 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 SCARB2Q14108 478 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 TMEM44Q2T9K0 475 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 GALNTL5Q7Z4T8 443 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 SYNPOQ8N3V7 929 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 RFT1Q96AA3 541 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 ATP13A3Q9H7F0 1226 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 TCF7L1Q9HCS4 588 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 ABCC6O95255 1503 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 SNNO75324 88 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 SNAPC5O75971 98 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 SERPINA3P01011 423 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 KCNA5P22460 613 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 CHIT1Q13231 466 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 CDKL4Q5MAI5 379 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 NCBP2-AS2Q69YL0 99 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 ANKRD54Q6NXT1 300 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 AGBL3Q8NEM8 1001 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 KCNA7Q96RP8 456 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF282Q9UDV7 671 aaPredicted RBP11.84□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF639Q9UID6 485 aa11.84□□□□□ -0.51
COL12A1-202ENST00000345356 TEX46H3BTG2 121 aa11.83□□□□□ -0.51
COL12A1-202ENST00000345356 VILLO15195 856 aa11.83□□□□□ -0.51
COL12A1-202ENST00000345356 PPM1BO75688 479 aa11.83□□□□□ -0.51
COL12A1-202ENST00000345356 TLX1P31314 330 aaPredicted RBP11.83□□□□□ -0.51
COL12A1-202ENST00000345356 RAB5BP61020 215 aa11.83□□□□□ -0.51
COL12A1-202ENST00000345356 ARL9Q6T311 187 aa11.83□□□□□ -0.51
COL12A1-202ENST00000345356 ZNF548Q8NEK5 533 aaPredicted RBP11.83□□□□□ -0.51
COL12A1-202ENST00000345356 MAFIPQ8WZ33 124 aa11.83□□□□□ -0.51
COL12A1-202ENST00000345356 CTPS2Q9NRF8 586 aa11.83□□□□□ -0.51
COL12A1-202ENST00000345356 EXTL2Q9UBQ6 330 aa11.83□□□□□ -0.51
COL12A1-202ENST00000345356 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 DFNA5O60443 496 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms