RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 OTOAQ7RTW8 1153 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 OOSP2Q86WS3 158 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 PLD6Q8N2A8 252 aaKnown RBP13.39□□□□□ -0.27
TPM4-202ENST00000344824 ZBTB2Q8N680 514 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 BANPQ8N9N5 519 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 ANKRD49Q8WVL7 239 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 SCYL1Q96KG9 808 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 IQCGQ9H095 443 aaKnown RBP13.39□□□□□ -0.27
TPM4-202ENST00000344824 MLXIPLQ9NP71 852 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 RUVBL2Q9Y230 463 aaKnown RBP13.39□□□□□ -0.27
TPM4-202ENST00000344824 HEBP2Q9Y5Z4 205 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 ACTL7BQ9Y614 415 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 COLEC10Q9Y6Z7 277 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 TMEM120BA0PK00 339 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 ZNF37AP17032 561 aaPredicted RBP13.39□□□□□ -0.27
TPM4-202ENST00000344824 NDUFS1P28331 727 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 GLRBP48167 497 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 ATP1A2P50993 1020 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 DLG1Q12959 904 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 TGIF1Q15583 401 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 ANKS6Q68DC2 871 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 CDHR3Q6ZTQ4 885 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 ARHGAP22Q7Z5H3 698 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 CNPY4Q8N129 248 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 INPP5DQ92835 1189 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 ALKBH8Q96BT7 664 aaKnown RBP13.39□□□□□ -0.27
TPM4-202ENST00000344824 NXNL1Q96CM4 212 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 LINGO1Q96FE5 620 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 ZDHHC12Q96GR4 267 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 TAAR9Q96RI9 348 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 OR52A5Q9H2C5 316 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 KIR3DX1Q9H7L2 352 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 POPDC3Q9HBV1 291 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 CPNE5Q9HCH3 593 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 SLC17A7Q9P2U7 560 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 DHRS7Q9Y394 339 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 B3GALT1Q9Y5Z6 326 aa13.39□□□□□ -0.27
TPM4-202ENST00000344824 GSAPA4D1B5 854 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 OR6C74A6NCV1 312 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 LIN7AO14910 233 aaPredicted RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 POLR3GO15318 223 aaPredicted RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 NVLO15381 856 aaKnown RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 GLRA3O75311 464 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 LTA4HP09960 611 aaKnown RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 LIPCP11150 499 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 POLR2CP19387 275 aaPredicted RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 RPA3P35244 121 aaPredicted RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 SKIV2L2P42285 1042 aaKnown RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 CCT5P48643 541 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 ARL4DP49703 201 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 CSRP3P50461 194 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 RAB15P59190 212 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 HSPA14Q0VDF9 509 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 PRKAA1Q13131 559 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 PRKG2Q13237 762 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 CLN3Q13286 438 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 ACSBG2Q5FVE4 666 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 CAPRIN2Q6IMN6 1127 aaKnown RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 PDZD3Q86UT5 571 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 CENPLQ8N0S6 344 aaPredicted RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 CCDC63Q8NA47 563 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 PHC3Q8NDX5 983 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 FAM76AQ8TAV0 307 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 TCP10LQ8TDR4 215 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 EEF1AKMT1Q8WVE0 214 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 LCN9Q8WX39 176 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 PAIP2Q9BPZ3 127 aaKnown RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 DPH1Q9BZG8 443 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 SYTL2Q9HCH5 934 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 APMAPQ9HDC9 416 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 IGSF5Q9NSI5 407 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 HRASLS2Q9NWW9 162 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 FAM53CQ9NYF3 392 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 ASF1AQ9Y294 204 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 TDRKHQ9Y2W6 561 aaKnown RBP13.38□□□□□ -0.27
TPM4-202ENST00000344824 ANKRD12Q6UB98 2062 aa13.38□□□□□ -0.27
TPM4-202ENST00000344824 OR5K3A6NET4 321 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 PRPF4O43172 522 aaKnown RBP eCLIP13.37□□□□□ -0.272e-10■■□□□ 13.2
TPM4-202ENST00000344824 TYROBPO43914 113 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 KLHL2O95198 593 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 WISP3O95389 354 aaPredicted RBP13.37□□□□□ -0.27
TPM4-202ENST00000344824 C9P02748 559 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 APOA4P06727 396 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 GSTM1P09488 218 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 AOAHP28039 575 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 CRHR1P34998 444 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 TMPRSS3P57727 454 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 IL2P60568 153 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 SH3BP2P78314 561 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 GSTM4Q03013 218 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 RPA4Q13156 261 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 MPP2Q14168 576 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 TTLL9Q3SXZ7 439 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 DCAF12Q5T6F0 453 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 ARHGAP40Q5TG30 622 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 CEACAM20Q6UY09 585 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 PIWIL4Q7Z3Z4 852 aaKnown RBP13.37□□□□□ -0.27
TPM4-202ENST00000344824 VASH2Q86V25 355 aa13.37□□□□□ -0.27
TPM4-202ENST00000344824 NKAPQ8N5F7 415 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms