RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.89□□□□□ -0.19
HMGN3-202ENST00000344726 IZUMO3Q5VZ72 239 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 ZNF385CQ66K41 422 aaPredicted RBP13.89□□□□□ -0.19
HMGN3-202ENST00000344726 CPZQ66K79 652 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 FAM198BQ6UWH4 519 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 ATG14Q6ZNE5 492 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 ZBTB2Q8N680 514 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 GSDMBQ8TAX9 411 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 RAD51AP1Q96B01 352 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 CLIP3Q96DZ5 547 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 PWWP2AQ96N64 755 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 EPN3Q9H201 632 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 PLAC1Q9HBJ0 212 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 SERTAD3Q9UJW9 196 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 SLC39A10Q9ULF5 831 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 POLHQ9Y253 713 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 FAM169AQ9Y6X4 670 aa13.89□□□□□ -0.19
HMGN3-202ENST00000344726 A0A1W2PPV9 198 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 ARHGEF33A8MVX0 844 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 E5RI56 91 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 MAP3K7O43318 606 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 HAUS5O94927 633 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 RECKO95980 971 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 PGAM1P18669 254 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 PSMB5P28074 263 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 ATP5DP30049 168 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 PMS2P54278 862 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 TLE1Q04724 770 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 CHAF1BQ13112 559 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 CUL1Q13616 776 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 FASTKQ14296 549 aaKnown RBP13.88□□□□□ -0.19
HMGN3-202ENST00000344726 CRYMQ14894 314 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 UGT8Q16880 541 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 KLHL38Q2WGJ6 581 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 HSP90AA5PQ58FG0 334 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 FCRL6Q6DN72 434 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 KCNMB4Q86W47 210 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 TMEM151BQ8IW70 566 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 SYTL1Q8IYJ3 562 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 ENDOVQ8N8Q3 282 aaKnown RBP13.88□□□□□ -0.19
HMGN3-202ENST00000344726 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.88□□□□□ -0.19
HMGN3-202ENST00000344726 ADAMTS17Q8TE56 1095 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 WDR83Q9BRX9 315 aaKnown RBP13.88□□□□□ -0.19
HMGN3-202ENST00000344726 TRIM51Q9BSJ1 452 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 GPR87Q9BY21 358 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 IARS2Q9NSE4 1012 aaKnown RBP13.88□□□□□ -0.19
HMGN3-202ENST00000344726 FBXO5Q9UKT4 447 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 FARSAQ9Y285 508 aaKnown RBP13.88□□□□□ -0.19
HMGN3-202ENST00000344726 VPS9D1Q9Y2B5 631 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 MAN2B2Q9Y2E5 1009 aa13.88□□□□□ -0.19
HMGN3-202ENST00000344726 PRRC2CQ9Y520 2896 aaKnown RBP13.87□□□□□ -0.19
HMGN3-202ENST00000344726 TP73O15350 636 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 TTI1O43156 1089 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 NRP2O60462 931 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 PSIP1O75475 530 aaKnown RBP13.87□□□□□ -0.19
HMGN3-202ENST00000344726 OR2B3O76000 313 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 KLK3P07288 261 aaPredicted RBP13.87□□□□□ -0.19
HMGN3-202ENST00000344726 CBSLP0DN79 551 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 ERVK-10P10266 1014 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 CBSP35520 551 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 CCNFP41002 786 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 RPS15P62841 145 aaKnown RBP13.87□□□□□ -0.19
HMGN3-202ENST00000344726 YBX1P67809 324 aaKnown RBP13.87□□□□□ -0.19
HMGN3-202ENST00000344726 TIAL1Q01085 375 aaKnown RBP eCLIP13.87□□□□□ -0.19
HMGN3-202ENST00000344726 DR1Q01658 176 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 TTC23LQ6PF05 361 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 PCGF5Q86SE9 256 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 SYVN1Q86TM6 617 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 HMGCLL1Q8TB92 370 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 FOPNLQ96NB1 174 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 EBNA1BP2Q99848 306 aaKnown RBP13.87□□□□□ -0.19
HMGN3-202ENST00000344726 TLK1Q9UKI8 766 aa13.87□□□□□ -0.19
HMGN3-202ENST00000344726 RFPL1O75677 317 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 RAB40ALP0C0E4 278 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 ERGP11308 486 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 GABRB3P28472 473 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 GRIA3P42263 894 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 GCGRP47871 477 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 FOXL2P58012 376 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 SF1Q15637 639 aaKnown RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 CYP2A13Q16696 494 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 BBS9Q3SYG4 887 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 LACTB2Q53H82 288 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 HP1BP3Q5SSJ5 553 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 C1orf189Q5VU69 101 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 RHBDD2Q6NTF9 364 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 HIBCHQ6NVY1 386 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 FIGLAQ6QHK4 219 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 APLFQ8IW19 511 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 LMNTD2Q8IXW0 634 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 GPR135Q8IZ08 494 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 C17orf53Q8N3J3 647 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 ZNF655Q8N720 491 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 C2CD4AQ8NCU7 369 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 CD200R1Q8TD46 325 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 CALML6Q8TD86 181 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 KCNJ9Q92806 393 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 SLC22A18Q96BI1 424 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms