RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PIP5K1BO14986 540 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 LINC01565O15544 149 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 GSTM5P46439 218 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 RABIFP47224 123 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 LGALS3BPQ08380 585 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 ADGRD2Q7Z7M1 963 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 ZMIZ2Q8NF64 920 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 MUC13Q9H3R2 512 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 VPS29Q9UBQ0 182 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 CFL2Q9Y281 166 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 NDUFS4O43181 175 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 PCDH7O60245 1069 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 AHSGP02765 367 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 HRH2P25021 359 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 KLF10Q13118 480 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 TMEM174Q8WUU8 243 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 LENG8Q96PV6 779 aaPredicted RBP16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 MTERF1Q99551 399 aaKnown RBP16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 EBPLQ9BY08 206 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 PDP2Q9P2J9 529 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 UGT2B17O75795 530 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 CTHP32929 405 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 ZDHHC24Q6UX98 284 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 PHF11Q9UIL8 331 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 LYVE1Q9Y5Y7 322 aa16.01■□□□□ 0.15
SMARCA4-201ENST00000344626 SOBPA7XYQ1 873 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 KHKP50053 298 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 HSPB3Q12988 150 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 TMED1Q13445 227 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 DEPDC4Q8N2C3 294 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 C2CD4AQ8NCU7 369 aaPredicted RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 CPEB1Q9BZB8 566 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 MVB12BQ9H7P6 319 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 CSNK1G1Q9HCP0 422 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 CCKBRP32239 447 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC7A2P52569 658 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 FAM220AQ7Z4H9 259 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 TMEM156Q8N614 296 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 PIK3C3Q8NEB9 887 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 ATP6V1C2Q8NEY4 427 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 NAT14Q8WUY8 206 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 RMND5BQ96G75 393 aaPredicted RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 C5orf34Q96MH7 638 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 GPR22Q99680 433 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 OSBPL10Q9BXB5 764 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 XKR8Q9H6D3 395 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 TEX264Q9Y6I9 313 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 RIF1Q5UIP0 2472 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 CAPN8A6NHC0 703 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 HSMCR30P0CW71 290 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 ATP6V1B1P15313 513 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 C11orf65Q8NCR3 313 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 TEX47Q8TBZ9 253 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC5A11Q8WWX8 675 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 SMAD5Q99717 465 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 CWH43Q9H720 699 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 ZDHHC18Q9NUE0 388 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 MAP4K5Q9Y4K4 846 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 A6NCN8 305 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 CSNK2A2P19784 350 aaPredicted RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 CD6P30203 668 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 CLDN2P57739 230 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 TRIM61Q5EBN2 209 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 ZNF648Q5T619 568 aaPredicted RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 AGTRAPQ6RW13 159 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 CNTD1Q8N815 330 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 OR2T34Q8NGX1 318 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 HCAR2Q8TDS4 363 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 EEF1AKMT1Q8WVE0 214 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 DGAT2Q96PD7 388 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 VPS35Q96QK1 796 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 TRIM39Q9HCM9 518 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 THUMPD1Q9NXG2 353 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 ZNF282Q9UDV7 671 aaPredicted RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 C3orf18Q9UK00 162 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 ATXN2Q99700 1313 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 MARF1Q9Y4F3 1742 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 DUXAA6NLW8 204 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 ERI3O43414 337 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 CST1P01037 141 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 FEN1P39748 380 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 TTC23Q5W5X9 447 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 GK5Q6ZS86 529 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC47A1Q96FL8 570 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 ADAM30Q9UKF2 790 aa16■□□□□ 0.15
SMARCA4-201ENST00000344626 SAMHD1Q9Y3Z3 626 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 MYH9P35579 1960 aaKnown RBP16■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC16A5O15375 505 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 IFNGP01579 166 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 FAM58BPP0C7Q3 252 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 GSSP48637 474 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 FRG2Q64ET8 278 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 PIM3Q86V86 326 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 COX18Q8N8Q8 333 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 SLC35G5Q96KT7 338 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 MRGPRX2Q96LB1 330 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 FRG2BQ96QU4 278 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 FOXQ1Q9C009 403 aa15.99■□□□□ 0.15
SMARCA4-201ENST00000344626 PNO1Q9NRX1 252 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 196.4 ms