RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 XKR6Q5GH73 641 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 C8orf82Q6P1X6 216 aaPredicted RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 CYP20A1Q6UW02 462 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 PDZD3Q86UT5 571 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SYTL1Q8IYJ3 562 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 ARHGAP24Q8N264 748 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 OR9A1PQ8NGU1 263 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SELENOMQ8WWX9 145 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 TFGQ92734 400 aaPredicted RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 APOOQ9BUR5 198 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SLC25A23Q9BV35 468 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SPNS1Q9H2V7 528 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 RNPEPL1Q9HAU8 725 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 FGF22Q9HCT0 170 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 MOSPD1Q9UJG1 213 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 DLGAP4Q9Y2H0 992 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 MUC3AQ02505 3323 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 FXYD1O00168 92 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 CLGNO14967 610 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SH3BGRLO75368 114 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SLC22A3O75751 556 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 C7P10643 843 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 TCN1P20061 433 aaPredicted RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 CLCNKAP51800 687 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 PSME3P61289 254 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 IRF8Q02556 426 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 CAPRIN1Q14444 709 aaKnown RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 E2F5Q15329 346 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 MAP7D1Q3KQU3 841 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 GGTA1PQ4G0N0 100 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 FBXO15Q8NCQ5 510 aaPredicted RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 CLHC1Q8NHS4 586 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 APIPQ96GX9 242 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 BMFQ96LC9 184 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 UHRF1Q96T88 793 aaPredicted RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 CCT7Q99832 543 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 FZD4Q9ULV1 537 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 CA14Q9ULX7 337 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SUFUQ9UMX1 484 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SLC17A4Q9Y2C5 497 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 TDRKHQ9Y2W6 561 aaKnown RBP13.16□□□□□ -0.3
CDC42-202ENST00000344548 MYO15AQ9UKN7 3530 aa13.16□□□□□ -0.3
CDC42-202ENST00000344548 SEC22BO75396 215 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 ETHE1O95571 254 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 CHRNB1P11230 501 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 ACADMP11310 421 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 SRFP11831 508 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 JUPP14923 745 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 EZRP15311 586 aaKnown RBP13.15□□□□□ -0.3
CDC42-202ENST00000344548 TACR1P25103 407 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 DGKQP52824 942 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 TDGQ13569 410 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 RCAN2Q14206 197 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 MLF2Q15773 248 aaPredicted RBP13.15□□□□□ -0.3
CDC42-202ENST00000344548 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 C16orf89Q6UX73 402 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 BNC2Q6ZN30 1099 aaPredicted RBP13.15□□□□□ -0.3
CDC42-202ENST00000344548 USP30Q70CQ3 517 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 ZNF687Q8N1G0 1237 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 KRTCAP2Q8N6L1 136 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 WDR20Q8TBZ3 569 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 MTERF1Q99551 399 aaKnown RBP13.15□□□□□ -0.3
CDC42-202ENST00000344548 MENTQ9BUN1 341 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 SLC29A3Q9BZD2 475 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 ELOVL6Q9H5J4 265 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 FBRSQ9HAH7 460 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 PREBQ9HCU5 417 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 PHPT1Q9NRX4 125 aaPredicted RBP13.15□□□□□ -0.3
CDC42-202ENST00000344548 PRORSD1PA6NEY8 169 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 KMOO15229 486 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 PSMG1O95456 288 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 TEAD1P28347 426 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 RGS19P49795 217 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 MEF2AQ02078 507 aaPredicted RBP13.15□□□□□ -0.3
CDC42-202ENST00000344548 RCN1Q15293 331 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 TLR1Q15399 786 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 MAPRE2Q15555 327 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 PDCD4Q53EL6 469 aaKnown RBP13.15□□□□□ -0.3
CDC42-202ENST00000344548 PYCR3Q53H96 274 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 EOGTQ5NDL2 527 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 FRG2Q64ET8 278 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 RNF111Q6ZNA4 994 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 KLHDC8AQ8IYD2 350 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 SPDL1Q96EA4 605 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 FRG2BQ96QU4 278 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 INSM2Q96T92 566 aaPredicted RBP13.15□□□□□ -0.3
CDC42-202ENST00000344548 BTBD1Q9H0C5 482 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 OSGEPL1Q9H4B0 414 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 LRTM1Q9HBL6 345 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 PRDM6Q9NQX0 595 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 SLCO1B1Q9Y6L6 691 aa13.15□□□□□ -0.3
CDC42-202ENST00000344548 RGS14O43566 566 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 KRT6AP02538 564 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 KRT6BP04259 564 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 CCND1P24385 295 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 GNPDA1P46926 289 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 KRT6CP48668 564 aa13.14□□□□□ -0.31
CDC42-202ENST00000344548 MRPL19P49406 292 aaKnown RBP13.14□□□□□ -0.31
CDC42-202ENST00000344548 POLR2JP52435 117 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms