RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CPEB1Q9BZB8 566 aaKnown RBP14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 ING2Q9H160 280 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 TOR3AQ9H497 397 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 KAT8Q9H7Z6 458 aaKnown RBP14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 SERHLQ9NQF3 203 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 A0A1W2PQ67 120 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 HIDE1A8MVS5 230 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 NUAK1O60285 661 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 EFNA1P20827 205 aaPredicted RBP14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 CYP2A7P20853 494 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 CTBSQ01459 385 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 PON2Q15165 354 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 SMU1Q2TAY7 513 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 TMEM259Q4ZIN3 620 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 LY6G5CQ5SRR4 150 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 OR4F3Q6IEY1 312 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 AADATQ8N5Z0 425 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 MED8Q96G25 268 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 SH3GL1Q99961 368 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 TCF25Q9BQ70 676 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 FAM83DQ9H4H8 585 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 DNAJC11Q9NVH1 559 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 HCFC2Q9Y5Z7 792 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 WNT6Q9Y6F9 365 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 PLXNB3Q9ULL4 1909 aa14.49□□□□□ -0.09
VIPAS39-202ENST00000343765 CREG1O75629 220 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 PRKACGP22612 351 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 SLC6A12P48065 614 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 PREPP48147 710 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 MAPK10P53779 464 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 CLDN8P56748 225 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 SLC14A1Q13336 389 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 C11orf91Q3C1V1 193 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 METTL2BQ6P1Q9 378 aaKnown RBP14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 KCTD8Q6ZWB6 473 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 USP51Q70EK9 711 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 ADIPOR2Q86V24 386 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 LILRA3Q8N6C8 439 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 MCOLN3Q8TDD5 553 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 ISOC1Q96CN7 298 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 MTERF1Q99551 399 aaKnown RBP14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 CPPED1Q9BRF8 314 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 RIOK2Q9BVS4 552 aaKnown RBP14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 ADNPQ9H2P0 1102 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 PCDH12Q9NPG4 1184 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 ASIC5Q9NY37 505 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 TUBA8Q9NY65 449 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 IFT80Q9P2H3 777 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 TMX2-CTNND1H3BSU7 103 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 E2F6O75461 281 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 PBLDP30039 288 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 TPD52P55327 224 aaPredicted RBP14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 ERVFC1P60507 584 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 NTHL1P78549 312 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 VAC14Q08AM6 782 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 GPR107Q5VW38 600 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 FRG2Q64ET8 278 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 GALNT10Q86SR1 603 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 TMEM132CQ8N3T6 1108 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 IRF7Q92985 503 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 FRG2BQ96QU4 278 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 MAFFQ9ULX9 164 aa14.48□□□□□ -0.09
VIPAS39-202ENST00000343765 NUP214P35658 2090 aaPredicted RBP14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 TRBV5-3A0A0A0MS03 114 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 C16orf96A6NNT2 1141 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 RFXANKO14593 260 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 IL7RP16871 459 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 POLR2LP62875 67 aaKnown RBP14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 IRF8Q02556 426 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 CREMQ03060 361 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 ZBED5Q49AG3 693 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 ANKRD26P1Q6NSI1 321 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 DOK6Q6PKX4 331 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 RNF165Q6ZSG1 346 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 TCAIMQ8N3R3 496 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 OR7A2PQ8NGA2 310 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 ITCHQ96J02 903 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 RMND5AQ9H871 391 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 CXorf21Q9HAI6 301 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 DNAJB9Q9UBS3 223 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 A0A096LPI6 279 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 TRIM43BA6NCK2 446 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 FADS2P1A8MWK0 482 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 CFAP99D6REC4 459 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 PRSS23O95084 383 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 SCELO95171 688 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 HNMTP50135 292 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 PFN3P60673 137 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 SPIDRQ14159 915 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 GBX1Q14549 363 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 RAB39AQ14964 217 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 CCSMST1Q4G0I0 132 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 SYTL3Q4VX76 610 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 LRRC23Q53EV4 343 aaPredicted RBP14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 CCNYL2Q5T2Q4 361 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 GPR180Q86V85 440 aa14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 ERI1Q8IV48 349 aaKnown RBP14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 TRIM43Q96BQ3 446 aaPredicted RBP14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 C12orf43Q96C57 262 aaKnown RBP14.47□□□□□ -0.09
VIPAS39-202ENST00000343765 CEP44Q9C0F1 390 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms