RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CAMKK1Q8N5S9 505 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 COPS8Q99627 209 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 TUBA1CQ9BQE3 449 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 MCMBPQ9BTE3 642 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 DSN1Q9H410 356 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 IL37Q9NZH6 218 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 SLC22A14Q9Y267 594 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 IQCA1LA6NCM1 817 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 EFCAB10A6NFE3 127 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 SLC22A1O15245 554 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 SERPIND1P05546 499 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 STSP08842 583 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 DGKAP23743 735 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 CDKN2CP42773 168 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 PSMD8P48556 350 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 INO80DQ53TQ3 878 aaPredicted RBP13.8□□□□□ -0.2
PCDH8-201ENST00000338862 CARD16Q5EG05 197 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 B3GNT8Q7Z7M8 397 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 ADGRG2Q8IZP9 1017 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 HSH2DQ96JZ2 352 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 ZNF641Q96N77 438 aaPredicted RBP13.8□□□□□ -0.2
PCDH8-201ENST00000338862 TOR4AQ9NXH8 423 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 SLCO3A1Q9UIG8 710 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 ARID2Q68CP9 1835 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 ZNF701M0R085 212 aaPredicted RBP13.8□□□□□ -0.2
PCDH8-201ENST00000338862 UGT2B11O75310 529 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 TYMPP19971 482 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 RRM2P31350 389 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 CREMQ03060 361 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 TUBA3CQ13748 450 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 RUNDC3AQ59EK9 446 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 UBE2R2Q712K3 238 aaPredicted RBP13.8□□□□□ -0.2
PCDH8-201ENST00000338862 HMGN2P46Q86SG4 172 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 GPR65Q8IYL9 337 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 TTC30BQ8N4P2 665 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 ATL1Q8WXF7 558 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 GTF2H4Q92759 462 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 OR51E2Q9H255 320 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 TMEM248Q9NWD8 314 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 THUMPD1Q9NXG2 353 aaKnown RBP13.8□□□□□ -0.2
PCDH8-201ENST00000338862 GPR83Q9NYM4 423 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 LTBP3Q9NS15 1303 aa13.8□□□□□ -0.2
PCDH8-201ENST00000338862 ARID1BQ8NFD5 2236 aaPredicted RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 OR2AG2A6NM03 316 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 PRAMEF11O60813 436 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 SULT1C4O75897 302 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 ALDH7A1P49419 539 aaKnown RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 RAB25P57735 213 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 CYP4F8P98187 520 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 RUNX1T1Q06455 604 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 CSTF3Q12996 717 aaKnown RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 MAD2L1Q13257 205 aaPredicted RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 TAF1AQ15573 450 aaPredicted RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 ZNF404Q494X3 552 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 DESI1Q6ICB0 168 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 SUSD1Q6UWL2 747 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 CCDC80Q76M96 950 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 TRIM48Q8IWZ4 208 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 SVOPLQ8N434 492 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 BPIFB1Q8TDL5 484 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 SH3KBP1Q96B97 665 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 VPS35Q96QK1 796 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 MBOAT4Q96T53 435 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 ZFYVE1Q9HBF4 777 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 TIGARQ9NQ88 270 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 RAB23Q9ULC3 237 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 ALOX5P09917 674 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 SOX6P35712 828 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 IFITM3Q01628 133 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 TRIP12Q14669 1992 aaPredicted RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 STARD3Q14849 445 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 GPR162Q16538 588 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 CCBE1Q6UXH8 406 aaPredicted RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 NLGN4XQ8N0W4 816 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 TTPALQ9BTX7 342 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 SNTG1Q9NSN8 517 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 MAP4K5Q9Y4K4 846 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 TMEM221A6NGB7 291 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 COQ9O75208 318 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 CCDC159P0C7I6 412 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 BMP1P13497 986 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 XPAP23025 273 aaPredicted RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 SLC26A3P40879 764 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 ALDH9A1P49189 494 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 HUNKP57058 714 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 ZNF33AQ06730 810 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 TTLL9Q3SXZ7 439 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 XKR6Q5GH73 641 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 WDR36Q8NI36 951 aaKnown RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 ZNF382Q96SR6 550 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 TCF25Q9BQ70 676 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 ACAT2Q9BWD1 397 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 RNF38Q9H0F5 515 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 C8orf4Q9NR00 106 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 NLE1Q9NVX2 485 aaPredicted RBP13.79□□□□□ -0.2
PCDH8-201ENST00000338862 CDH7Q9ULB5 785 aa13.79□□□□□ -0.2
PCDH8-201ENST00000338862 KLHL20Q9Y2M5 609 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms