RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 ANP32DO95626 131 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 PAK4O96013 591 aaPredicted RBP15.78■□□□□ 0.12
HPS1-202ENST00000338546 PDYNP01213 254 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 G6PDP11413 515 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 COL9A1P20849 921 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 KELP23276 732 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 DPP6P42658 865 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 NME5P56597 212 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 CCNIQ14094 377 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 TRIM25Q14258 630 aaKnown RBP15.78■□□□□ 0.12
HPS1-202ENST00000338546 FGL2Q14314 439 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 NFE2L1Q14494 772 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 KIAA0040Q15053 153 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 WLSQ5T9L3 541 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 DCUN1D3Q8IWE4 304 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 DENND6BQ8NEG7 585 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 ZNF480Q8WV37 535 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 CCDC124Q96CT7 223 aaKnown RBP15.78■□□□□ 0.12
HPS1-202ENST00000338546 PHF7Q9BWX1 381 aaPredicted RBP15.78■□□□□ 0.12
HPS1-202ENST00000338546 LGR4Q9BXB1 951 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 BRF2Q9HAW0 419 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 ADA2Q9NZK5 511 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 CD300AQ9UGN4 299 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 ZNHIT2Q9UHR6 403 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 SLC17A4Q9Y2C5 497 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 PCDHGA11Q9Y5H2 935 aa15.78■□□□□ 0.12
HPS1-202ENST00000338546 BRWD1Q9NSI6 2320 aa15.77■□□□□ 0.12
HPS1-202ENST00000338546 C15orf38-AP3S2A0A0A6YYH1 394 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 ZNF839A8K0R7 811 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 H3BQ06 376 aaPredicted RBP15.77■□□□□ 0.11
HPS1-202ENST00000338546 PI15O43692 258 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 SEC22BO75396 215 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 RPL38P63173 70 aaKnown RBP15.77■□□□□ 0.11
HPS1-202ENST00000338546 TLR1Q15399 786 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 CCSMST1Q4G0I0 132 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 XKR6Q5GH73 641 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 ZFP1Q6P2D0 407 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 FAM83HQ6ZRV2 1179 aaPredicted RBP15.77■□□□□ 0.11
HPS1-202ENST00000338546 ARPINQ7Z6K5 226 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 CACUL1Q86Y37 369 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 PHC3Q8NDX5 983 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 FOXJ1Q92949 421 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 LRRC58Q96CX6 371 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 REPS1Q96D71 796 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 ERLEC1Q96DZ1 483 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 MED8Q96G25 268 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 GAS2L1Q99501 681 aaPredicted RBP15.77■□□□□ 0.11
HPS1-202ENST00000338546 ACPTQ9BZG2 426 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 FARSBQ9NSD9 589 aaKnown RBP15.77■□□□□ 0.11
HPS1-202ENST00000338546 LIMD1Q9UGP4 676 aa15.77■□□□□ 0.11
HPS1-202ENST00000338546 POLR3HQ9Y535 204 aaPredicted RBP15.77■□□□□ 0.11
HPS1-202ENST00000338546 PRAMEF4O60810 478 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 IL6P05231 212 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 ACADMP11310 421 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 PTDSS1P48651 473 aaKnown RBP15.76■□□□□ 0.11
HPS1-202ENST00000338546 HMGCS1Q01581 520 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 LAPTM5Q13571 262 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 DOC2AQ14183 400 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 FLOT2Q14254 428 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 SGO1Q5FBB7 561 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 PRAMEF9Q5VWM5 478 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 DOK6Q6PKX4 331 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 LPCAT2Q7L5N7 544 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 LRRC56Q8IYG6 542 aaPredicted RBP15.76■□□□□ 0.11
HPS1-202ENST00000338546 DNAJB8Q8NHS0 232 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 WDR20Q8TBZ3 569 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 TFGQ92734 400 aaPredicted RBP15.76■□□□□ 0.11
HPS1-202ENST00000338546 SCARF2Q96GP6 870 aaPredicted RBP15.76■□□□□ 0.11
HPS1-202ENST00000338546 FCRL1Q96LA6 429 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 TEX37Q96LM6 180 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 OR4K3Q96R72 315 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 UHRF1Q96T88 793 aaPredicted RBP15.76■□□□□ 0.11
HPS1-202ENST00000338546 HBEGFQ99075 208 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 EFCAB11Q9BUY7 163 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 ACTL8Q9H568 366 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 SLC2A4RGQ9NR83 387 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 TSC22D4Q9Y3Q8 395 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 DYRK1BQ9Y463 629 aa15.76■□□□□ 0.11
HPS1-202ENST00000338546 TBC1D3DA0A087WVF3 549 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 TBC1D3IA0A087WXS9 549 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 TBC1D3EA0A087X179 549 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 TBC1D3KA0A087X1G2 549 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 TBC1D3FA6NER0 549 aaPredicted RBP15.75■□□□□ 0.11
HPS1-202ENST00000338546 TBC1D3LB9A6J9 549 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 CACNB4O00305 520 aaPredicted RBP15.75■□□□□ 0.11
HPS1-202ENST00000338546 ACOT8O14734 319 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 TBC1D3HP0C7X1 549 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 ERGP11308 486 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 ANPEPP15144 967 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 XRCC1P18887 633 aaPredicted RBP15.75■□□□□ 0.11
HPS1-202ENST00000338546 VARSP26640 1264 aaKnown RBP15.75■□□□□ 0.11
HPS1-202ENST00000338546 IL12AP29459 219 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 VHLP40337 213 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 CLNS1AP54105 237 aaKnown RBP15.75■□□□□ 0.11
HPS1-202ENST00000338546 CTBSQ01459 385 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 TAP2Q03519 686 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 CCINQ13939 588 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 USP39Q53GS9 565 aaKnown RBP15.75■□□□□ 0.11
HPS1-202ENST00000338546 PAGE2BQ5JRK9 111 aa15.75■□□□□ 0.11
HPS1-202ENST00000338546 TBC1D3GQ6DHY5 549 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms