RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LNPEPQ9UIQ6 1025 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 USP34Q70CQ2 3546 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TRBV23OR9-2A0A075B6M9 112 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TLR4O00206 839 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 FFAR3O14843 346 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 GPR42O15529 346 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PRAMEF4O60810 478 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MTHFD1P11586 935 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CTSEP14091 401 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 HTR6P50406 440 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CHIT1Q13231 466 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PRAMEF9Q5VWM5 478 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 IQCHQ86VS3 1027 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 WDR5BQ86VZ2 330 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 C1orf210Q8IVY1 113 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CEP70Q8NHQ1 597 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 STON2Q8WXE9 905 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 DNASE2BQ8WZ79 361 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MENTQ9BUN1 341 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SGPP1Q9BX95 441 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 GSDMCQ9BYG8 508 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MVB12BQ9H7P6 319 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TRPS1Q9UHF7 1281 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 POLG2Q9UHN1 485 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PCOLCE2Q9UKZ9 415 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 G3BP2Q9UN86 482 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 KNL1Q8NG31 2342 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 E7EQ34 232 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 KIAA0754O94854 1291 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CELA2BP08218 269 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ERGP11308 486 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 JUNDP17535 347 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 BLKP51451 505 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 HNRNPH2P55795 449 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SRSF5Q13243 272 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 C1orf61Q13536 156 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 UBAP2LQ14157 1087 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CPSF6Q16630 551 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 WDR45BQ5MNZ6 344 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TMEM198Q66K66 360 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 LPCAT2Q7L5N7 544 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MAML2Q8IZL2 1156 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 GBP7Q8N8V2 638 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TMEM105Q8N8V8 129 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ACTRT2Q8TDY3 377 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CCDC177Q9NQR7 707 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SAR1AQ9NR31 198 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SPATA7Q9P0W8 599 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 HEBP2Q9Y5Z4 205 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SPAG17Q6Q759 2223 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SDK1Q7Z5N4 2213 aa14.29□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TP53BP1Q12888 1972 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 A6NCN8 305 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 F3P13726 295 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NPPBP16860 134 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 IRF8Q02556 426 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ARHGAP19Q14CB8 494 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SPRED3Q2MJR0 410 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 GALNTL6Q49A17 601 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 XKR6Q5GH73 641 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 THEMIS2Q5TEJ8 643 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 METTL21CQ5VZV1 264 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 IL27RAQ6UWB1 636 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 LARP4Q71RC2 724 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 YTHDF3Q7Z739 585 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TAF8Q7Z7C8 310 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 LONP2Q86WA8 852 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 L3MBTL4Q8NA19 623 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 OR52E1Q8NGJ3 308 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CATSPER2Q96P56 530 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 HBEGFQ99075 208 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 XKR8Q9H6D3 395 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 AKTIPQ9H8T0 292 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TAAR2Q9P1P5 351 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 GIMAP2Q9UG22 337 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 APOBEC3BQ9UH17 382 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TRIM33Q9UPN9 1127 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 KCNE2Q9Y6J6 123 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 COLEC10Q9Y6Z7 277 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NCOR1O75376 2440 aa14.28□□□□□ -0.12
CDK5RAP3-201ENST00000338399 KCNE1BA0A087WTH5 132 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CLGNO14967 610 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 WFS1O76024 890 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 HSD17B2P37059 387 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CSNK1EP49674 416 aaKnown RBP14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ABRAXAS2Q15018 415 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CYP2A13Q16696 494 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 GGTA1PQ4G0N0 100 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PRRT3Q5FWE3 981 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 RAB42Q8N4Z0 105 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NEIL2Q969S2 332 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TUBGCP3Q96CW5 907 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MTFMTQ96DP5 389 aaKnown RBP14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MARK4Q96L34 752 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MIPEPQ99797 713 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CCDC106Q9BWC9 280 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SH2B3Q9UQQ2 575 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 DYRK1BQ9Y463 629 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms