RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ZNF607Q96SK3 696 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 BOCQ9BWV1 1114 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 SAP18O00422 153 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 RB1P06400 928 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 BCKDHAP12694 445 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 MAT2AP31153 395 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 NTHL1P78549 312 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ERMP1Q7Z2K6 904 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 BIRC7Q96CA5 298 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 RBM4BQ9BQ04 359 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 RBM4Q9BWF3 364 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 KRCC1Q9NPI7 259 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 AIG1Q9NVV5 245 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 PCTPQ9UKL6 214 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 SORBS2O94875 1100 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 MAPK12P53778 367 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 MANEALQ5VSG8 457 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 BLOC1S3Q6QNY0 202 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 DEPDC4Q8N2C3 294 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 BTN2A2Q8WVV5 523 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CMTM7Q96FZ5 175 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF334Q9HCZ1 680 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 SEMA3GQ9NS98 782 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 HCFC1R1Q9NWW0 138 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CLIC1O00299 241 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 AP3D1O14617 1153 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CYP7B1O75881 506 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 RPS17P08708 135 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 RPS7P62081 194 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ILF3Q12906 894 aaKnown RBP eCLIP6.14□□□□□ -1.432e-6■■□□□ 13.8
PRKDC-202ENST00000338368 KCNC3Q14003 757 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 MINDY1Q8N5J2 469 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ARMC7Q9H6L4 198 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 PRDX3P30048 256 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 DEFA1P59665 94 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 DEFA3P59666 94 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 PPP1R8Q12972 351 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 MRPL58Q14197 206 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ADAMTS15Q8TE58 950 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 LINC00597Q9H2U6 94 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 WDR26Q9H7D7 661 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CDH1P12830 882 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CCNA2P20248 432 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CDK9P50750 372 aaKnown RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ERVPABLB-1P60509 514 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 C2orf27AQ580R0 203 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 CYP4Z2PQ8N1L4 340 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 HM13Q8TCT9 377 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF282Q9UDV7 671 aaPredicted RBP6.14□□□□□ -1.43
PRKDC-202ENST00000338368 KNL1Q8NG31 2342 aa6.14□□□□□ -1.43
PRKDC-202ENST00000338368 PCDH7O60245 1069 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 B4GALT3O60512 393 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 HPGDP15428 266 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 GM2AP17900 193 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ARF5P84085 180 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CTC1Q2NKJ3 1217 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PPP2R2DQ66LE6 453 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TADA1Q96BN2 335 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SIPA1Q96FS4 1042 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TMED5Q9Y3A6 229 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CFAP20Q9Y6A4 193 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 MUSKO15146 869 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 OR10H3O60404 316 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PAK4O96013 591 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PENKP01210 267 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ACP5P13686 325 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 EPCAMP16422 314 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 BDKRB1P46663 353 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TRPC1P48995 793 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 HSPB3Q12988 150 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 DHCR24Q15392 516 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TJAP1Q5JTD0 557 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PDE12Q6L8Q7 609 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TEX26Q8N6G2 289 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SLC43A3Q8NBI5 491 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 MAP4K5Q9Y4K4 846 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CAPN14A8MX76 684 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TIMP1P01033 207 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CYP4B1P13584 511 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 IGFBP5P24593 272 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ROR2Q01974 943 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ABRAXAS2Q15018 415 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 EIF4HQ15056 248 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CCDC85BQ15834 202 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 MBOAT1Q6ZNC8 495 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 ZFAND4Q86XD8 727 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 NACC2Q96BF6 587 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TRIB3Q96RU7 358 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 FANCFQ9NPI8 374 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PRKAB1Q9Y478 270 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 IGLV3-10A0A075B6K4 115 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PRORSD1PA6NEY8 169 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SOX6P35712 828 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CLCNKAP51800 687 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 PLA2G16P53816 162 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 TRAF3Q13114 568 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 DCTN2Q13561 401 aaKnown RBP6.13□□□□□ -1.43
PRKDC-202ENST00000338368 SH2D5Q6ZV89 423 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 LSMEM2Q8N112 164 aa6.13□□□□□ -1.43
PRKDC-202ENST00000338368 CHCHD4Q8N4Q1 142 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms