RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PPP2R2BQ00005 443 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 ZNF548Q8NEK5 533 aaPredicted RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 C11orf24Q96F05 449 aaPredicted RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 CNDP2Q96KP4 475 aaKnown RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 TSSK3Q96PN8 268 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 CDCA3Q99618 268 aaPredicted RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 DOCK5Q9H7D0 1870 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 BPIFB1Q8TDL5 484 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 KAT2AQ92830 837 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 BORCS5Q969J3 196 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 TCF7L1Q9HCS4 588 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 ZIM2Q9NZV7 527 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 A0A0U1RQF3 1178 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 MAGEA11P43364 429 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 HSPA7P48741 367 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 NCBP2P52298 156 aaKnown RBP eCLIP12.01□□□□□ -0.49
FN1-202ENST00000336916 CADM2Q8N3J6 435 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 MCFD2Q8NI22 146 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 FOXJ1Q92949 421 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 EMID1Q96A84 441 aaPredicted RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 PPM1MQ96MI6 270 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 G6PC3Q9BUM1 346 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 FAM186AA6NE01 2351 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 ATP6AP2A0A1C7CYW4 349 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 GJE1A6NN92 205 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 RLN1P04808 185 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 HERC3Q15034 1050 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 ELOCQ15369 112 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 IL17AQ16552 155 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 HSDL2Q6YN16 418 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 SETD7Q8WTS6 366 aaKnown RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 TOP1MTQ969P6 601 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 MARK4Q96L34 752 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 RNF121Q9H920 327 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 RPL36Q9Y3U8 105 aaKnown RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 ZNF541Q9H0D2 1346 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 GPR25O00155 361 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 HOXB2P14652 356 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 ZNF20P17024 532 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 TAL1P17542 331 aaPredicted RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 SLC10A6Q3KNW5 377 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 MBLAC2Q68D91 279 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 SIX5Q8N196 739 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 ELMO3Q96BJ8 720 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 NXPE2Q96DL1 559 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 TMEM209Q96SK2 561 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 DCUN1D5Q9BTE7 237 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 B3GNT5Q9BYG0 378 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 Q9N2J8 555 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 PFDN2Q9UHV9 154 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 CNOT6Q9ULM6 557 aaKnown RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 FAM240BA0A1B0GVZ2 78 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 TXNL4AP83876 142 aaKnown RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 HSPB3Q12988 150 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 SEMA5AQ13591 1074 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 TRAM1Q15629 374 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 FUKQ8N0W3 1084 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 C8orf33Q9H7E9 229 aaPredicted RBP12.01□□□□□ -0.49
FN1-202ENST00000336916 NLGN3Q9NZ94 848 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 PRODH2Q9UF12 536 aa12.01□□□□□ -0.49
FN1-202ENST00000336916 ANKRD36A6QL64 1941 aa12□□□□□ -0.49
FN1-202ENST00000336916 CCNE2O96020 404 aa12□□□□□ -0.49
FN1-202ENST00000336916 PEPDP12955 493 aa12□□□□□ -0.49
FN1-202ENST00000336916 GRK5P34947 590 aa12□□□□□ -0.49
FN1-202ENST00000336916 NUDT1P36639 197 aa12□□□□□ -0.49
FN1-202ENST00000336916 CASP9P55211 416 aa12□□□□□ -0.49
FN1-202ENST00000336916 C5orf22Q49AR2 442 aa12□□□□□ -0.49
FN1-202ENST00000336916 INO80EQ8NBZ0 244 aaPredicted RBP12□□□□□ -0.49
FN1-202ENST00000336916 TP53INP1Q96A56 240 aa12□□□□□ -0.49
FN1-202ENST00000336916 MYOCQ99972 504 aa12□□□□□ -0.49
FN1-202ENST00000336916 PLK2Q9NYY3 685 aa12□□□□□ -0.49
FN1-202ENST00000336916 TMX2-CTNND1H3BSU7 103 aa12□□□□□ -0.49
FN1-202ENST00000336916 RLN2P04090 185 aa12□□□□□ -0.49
FN1-202ENST00000336916 HBQ1P09105 142 aa12□□□□□ -0.49
FN1-202ENST00000336916 ATP1B2P14415 290 aaPredicted RBP12□□□□□ -0.49
FN1-202ENST00000336916 SLC18A1P54219 525 aa12□□□□□ -0.49
FN1-202ENST00000336916 PLEKHG6Q3KR16 790 aa12□□□□□ -0.49
FN1-202ENST00000336916 ZDHHC14Q8IZN3 488 aa12□□□□□ -0.49
FN1-202ENST00000336916 TMEM156Q8N614 296 aa12□□□□□ -0.49
FN1-202ENST00000336916 PSMG2Q969U7 264 aa12□□□□□ -0.49
FN1-202ENST00000336916 ARHGAP9Q9BRR9 750 aa12□□□□□ -0.49
FN1-202ENST00000336916 ALKBH4Q9NXW9 302 aa12□□□□□ -0.49
FN1-202ENST00000336916 GRIP1Q9Y3R0 1128 aa12□□□□□ -0.49
FN1-202ENST00000336916 ADAMTSL3P82987 1691 aa12□□□□□ -0.49
FN1-202ENST00000336916 ITGA10O75578 1167 aa12□□□□□ -0.49
FN1-202ENST00000336916 TCEA3O75764 348 aa12□□□□□ -0.49
FN1-202ENST00000336916 DSC2Q02487 901 aa12□□□□□ -0.49
FN1-202ENST00000336916 TUBA3CQ13748 450 aa12□□□□□ -0.49
FN1-202ENST00000336916 HORMAD2Q8N7B1 307 aa12□□□□□ -0.49
FN1-202ENST00000336916 ZSCAN4Q8NAM6 433 aaPredicted RBP12□□□□□ -0.49
FN1-202ENST00000336916 TMCO6Q96DC7 493 aa12□□□□□ -0.49
FN1-202ENST00000336916 TMEM109Q9BVC6 243 aa12□□□□□ -0.49
FN1-202ENST00000336916 CARS2Q9HA77 564 aaKnown RBP12□□□□□ -0.49
FN1-202ENST00000336916 TUBA8Q9NY65 449 aaPredicted RBP12□□□□□ -0.49
FN1-202ENST00000336916 RGPD4Q7Z3J3 1758 aa12□□□□□ -0.49
FN1-202ENST00000336916 SH3PXD2BA1X283 911 aa12□□□□□ -0.49
FN1-202ENST00000336916 FAM221BA6H8Z2 402 aa12□□□□□ -0.49
FN1-202ENST00000336916 BUD23O43709 281 aaKnown RBP12□□□□□ -0.49
FN1-202ENST00000336916 ECHS1P30084 290 aa12□□□□□ -0.49
FN1-202ENST00000336916 FOLH1Q04609 750 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms