RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ZNF451Q9Y4E5 1061 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 MAFBQ9Y5Q3 323 aaPredicted RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 WASHC1A8K0Z3 465 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 WASH3PC4AMC7 463 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 ENTPD6O75354 484 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 GDI2P50395 445 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 MC1RQ01726 317 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 IDNKQ5T6J7 187 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 PLPP4Q5VZY2 271 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 SYCE2Q6PIF2 218 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 WASH2PQ6VEQ5 465 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 TAC4Q86UU9 113 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 UBE2J2Q8N2K1 259 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 C1orf127Q8N9H9 656 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 OR2L8Q8NGY9 312 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 MFSD3Q96ES6 412 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 EPYCQ99645 322 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 MYOCQ99972 504 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 EIF2B4Q9UI10 523 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 TMED5Q9Y3A6 229 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 ERCC6L2Q5T890 1561 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 CAPN14A8MX76 684 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 IRAK2O43187 625 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 ZNF3P17036 446 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 IMPDH1P20839 514 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 MSX2P35548 267 aaPredicted RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 SPIN4Q56A73 249 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 TMEM220Q6QAJ8 160 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 CYP2U1Q7Z449 544 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 PIWIL1Q96J94 861 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 KXD1Q9BQD3 176 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 CADM1Q9BY67 442 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 TBC1D17Q9HA65 648 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 DUS2Q9NX74 493 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 PIAS1O75925 651 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 HERVK_113P63132 956 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 MXD1Q05195 221 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 DEFB132Q7Z7B7 95 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 HID1Q8IV36 788 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 C1orf216Q8TAB5 229 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 KCTD13Q8WZ19 329 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 DHRS1Q96LJ7 313 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 GTPBP2Q9BX10 602 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 ERVK-6Q9BXR3 956 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 POLR2J2Q9GZM3 115 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 RNF38Q9H0F5 515 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 RDH8Q9NYR8 311 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 DUSP11O75319 330 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 CYP17A1P05093 508 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 CBSLP0DN79 551 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 ALAS2P22557 587 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 PEX2P28328 305 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 NMBRP28336 390 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 CBSP35520 551 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 PTGIRP43119 386 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 MLLT6P55198 1093 aaPredicted RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 MINDY4Q4G0A6 757 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 SNAP47Q5SQN1 464 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 C6orf183Q5T699 404 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 UBAP2Q5T6F2 1119 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 FUT10Q6P4F1 479 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 CD300LFQ8TDQ1 290 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 GEMIN6Q8WXD5 167 aaKnown RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 ACDQ96AP0 544 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 RIPOR3Q96MK2 946 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 TMEM209Q96SK2 561 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 MAPKAP1Q9BPZ7 522 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 USP29Q9HBJ7 922 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 POLMQ9NP87 494 aaPredicted RBP12.82□□□□□ -0.36
HLCS-201ENST00000336648 TVP23BQ9NYZ1 205 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 PRDM4Q9UKN5 801 aa12.82□□□□□ -0.36
HLCS-201ENST00000336648 ARL6IP5O75915 188 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 IFNA2P01563 188 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 CYP11A1P05108 521 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 CSNK2A2P19784 350 aaPredicted RBP12.81□□□□□ -0.36
HLCS-201ENST00000336648 S100PP25815 95 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 TARDBPQ13148 414 aaKnown RBP eCLIP12.81□□□□□ -0.361e-6■■■□□ 18
HLCS-201ENST00000336648 PPIGQ13427 754 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLCS-201ENST00000336648 MADCAM1Q13477 382 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 FAM174BQ3ZCQ3 159 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 POMZP3Q6PJE2 187 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 PIGWQ7Z7B1 504 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 OR5J2Q8NH18 312 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 MRPS30Q9NP92 439 aaKnown RBP12.81□□□□□ -0.36
HLCS-201ENST00000336648 P2RX2Q9UBL9 471 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 A0A1W2PRB8 838 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 CCR8P51685 355 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 PRKCDQ05655 676 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 SCARB2Q14108 478 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 DEFB115Q30KQ5 88 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 ZNF782Q6ZMW2 699 aaPredicted RBP12.81□□□□□ -0.36
HLCS-201ENST00000336648 ABHD13Q7L211 337 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 CAND1Q86VP6 1230 aaKnown RBP12.81□□□□□ -0.36
HLCS-201ENST00000336648 OR10G2Q8NGC3 310 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 LRRN4Q8WUT4 740 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 NCSTNQ92542 709 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 ASB9Q96DX5 294 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 PADI2Q9Y2J8 665 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 BTBD19C9JJ37 291 aa12.81□□□□□ -0.36
HLCS-201ENST00000336648 hCG_2039718K7EN88 272 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms