RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ATXN10Q9UBB4 475 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 PCDHA9Q9Y5H5 950 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 SOCS2O14508 198 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 NDUFB5O43674 189 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 SOD1P00441 154 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 ADRB3P13945 408 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 ROR2Q01974 943 aaKnown RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 RHDQ02161 417 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 OGFRL1Q5TC84 451 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 ANKRD34AQ69YU3 496 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 GPR65Q8IYL9 337 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 OR7A2PQ8NGA2 310 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 OR2T34Q8NGX1 318 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 OR2T3Q8NH03 318 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 JPH3Q8WXH2 748 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 MTIF3Q9H2K0 278 aaKnown RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 RPF2Q9H7B2 306 aaKnown RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 CD93Q9NPY3 652 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 PFDN4Q9NQP4 134 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 LEF1Q9UJU2 399 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 DGKBQ9Y6T7 804 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 PLXNB3Q9ULL4 1909 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 IGLV3-16A0A075B6K0 115 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 PRAMEF33A0A0G2JMD5 474 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 A0A1W2PP55 124 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 STAMBPO95630 424 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 PAK4O96013 591 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 UQCRBP14927 111 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 CYP2A7P20853 494 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 EMX2Q04743 252 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 PDK3Q15120 406 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 FXNQ16595 210 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 HNRNPA1L2Q32P51 320 aaKnown RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 OR4F3Q6IEY1 312 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 OGFOD2Q6N063 350 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 C8orf82Q6P1X6 216 aaPredicted RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 AGTRAPQ6RW13 159 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 THOC6Q86W42 341 aaKnown RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 TERB1Q8NA31 727 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 OR8D1Q8WZ84 308 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 SLC35B4Q969S0 331 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 NUS1Q96E22 293 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 RNF145Q96MT1 663 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 OR52E6Q96RD3 313 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 SLC7A5P2Q9GIP4 190 aa12.23□□□□□ -0.45
LIMK1-201ENST00000336180 ZFC3H1O60293 1989 aaKnown RBP12.23□□□□□ -0.45
LIMK1-201ENST00000336180 COL6A3P12111 3177 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 DHRS12A0PJE2 317 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 FAM234BA2RU67 622 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ANKRD28O15084 1053 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 MATN4O95460 622 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ABCB1P08183 1280 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ZNF8P17098 575 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 OPRD1P41143 372 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ATP4BP51164 291 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 DOC2AQ14183 400 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 OTUD3Q5T2D3 398 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 DPPA4Q7L190 304 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 TRAM1L1Q8N609 369 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 PHOSPHO2Q8TCD6 241 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 FAM83CQ9BQN1 747 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 SORBS1Q9BX66 1292 aaKnown RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 SLC23A2Q9UGH3 650 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 SCOCQ9UIL1 159 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 EIF3LQ9Y262 564 aaKnown RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 H3BM21 787 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 CPSF4O95639 269 aaKnown RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 NFATC1O95644 943 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 FGF19O95750 216 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ETS2P15036 469 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 CD9P21926 228 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 P2RY2P41231 377 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 CYP4F2P78329 520 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 IRGCQ6NXR0 463 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 DLEU7Q6UYE1 221 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 NANOGNBQ7Z5D8 188 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 YAF2Q8IY57 180 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 BRINP2Q9C0B6 783 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 SPNS1Q9H2V7 528 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 OSGEPL1Q9H4B0 414 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 LTB4R2Q9NPC1 389 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 DNAJC11Q9NVH1 559 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 PPT2Q9UMR5 302 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 PLEKHM1Q9Y4G2 1056 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 VPS13AQ96RL7 3174 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ATG13O75143 517 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 VPS4BO75351 444 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 POP7O75817 140 aaKnown RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 KAT7O95251 611 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ZNF30P17039 623 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 HRH2P25021 359 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 SLC14A1Q13336 389 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 DMC1Q14565 340 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 LAPTM4AQ15012 233 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 MAPKAPK3Q16644 382 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 FOXB2Q5VYV0 432 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 KIAA1211LQ6NV74 962 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 KIAA0907Q7Z7F0 614 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-201ENST00000336180 ZNF547Q8IVP9 402 aa12.22□□□□□ -0.45
LIMK1-201ENST00000336180 CBR4Q8N4T8 237 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms