RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 EPHA3P29320 983 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 RACK1P63244 317 aaKnown RBP22.57■■□□□ 1.2
TSEN54-201ENST00000333213 SLC30A9Q6PML9 568 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 CLNKQ7Z7G1 428 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 DCUN1D3Q8IWE4 304 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 DUSP15Q9H1R2 295 aaPredicted RBP22.57■■□□□ 1.2
TSEN54-201ENST00000333213 TM9SF3Q9HD45 589 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 KATNA1O75449 491 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 CELA2BP08218 269 aaPredicted RBP22.57■■□□□ 1.2
TSEN54-201ENST00000333213 ACTR1BP42025 376 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 ACTR1AP61163 376 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 SRSF5Q13243 272 aaKnown RBP22.57■■□□□ 1.2
TSEN54-201ENST00000333213 NAA25Q14CX7 972 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 TCHHL1Q5QJ38 904 aaPredicted RBP22.57■■□□□ 1.2
TSEN54-201ENST00000333213 TTC23LQ6PF05 361 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 ARMCX6Q7L4S7 300 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 CDYL2Q8N8U2 506 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 ATL1Q8WXF7 558 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 DNASE2BQ8WZ79 361 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 RAD51AP1Q96B01 352 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 MAELQ96JY0 434 aaKnown RBP22.57■■□□□ 1.2
TSEN54-201ENST00000333213 C3orf30Q96M34 536 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 STN1Q9H668 368 aaKnown RBP22.57■■□□□ 1.2
TSEN54-201ENST00000333213 IMP3Q9NV31 184 aaKnown RBP22.57■■□□□ 1.2
TSEN54-201ENST00000333213 TDRKHQ9Y2W6 561 aaKnown RBP22.57■■□□□ 1.2
TSEN54-201ENST00000333213 ANGPTL3Q9Y5C1 460 aa22.57■■□□□ 1.2
TSEN54-201ENST00000333213 A6NCN8 305 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 E7ENX8 843 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 SDHDO14521 159 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 OTCP00480 354 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 TNFP01375 233 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 PKNOX1P55347 436 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 TAP2Q03519 686 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 ABRAXAS1Q6UWZ7 409 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 LONP2Q86WA8 852 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 C1orf210Q8IVY1 113 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 KLHDC8AQ8IYD2 350 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 TBC1D21Q8IYX1 336 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 FAM174AQ8TBP5 190 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 MED8Q96G25 268 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 RILPQ96NA2 401 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 NTMT1Q9BV86 223 aa22.56■■□□□ 1.2
TSEN54-201ENST00000333213 RPE65Q16518 533 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 THOC6Q86W42 341 aaKnown RBP22.55■■□□□ 1.2
TSEN54-201ENST00000333213 PARGQ86W56 976 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 TWIST2Q8WVJ9 160 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 ATP6V1E2Q96A05 226 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 FAR2Q96K12 515 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 FERD3LQ96RJ6 166 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 NMUR2Q9GZQ4 415 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 TRIT1Q9H3H1 467 aaKnown RBP22.55■■□□□ 1.2
TSEN54-201ENST00000333213 MEAF6Q9HAF1 191 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 DNAJC11Q9NVH1 559 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 PCOLCE2Q9UKZ9 415 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 RNF11Q9Y3C5 154 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 LAMTOR5O43504 91 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 CCDC22O60826 627 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 CAPN1P07384 714 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 INHBCP55103 352 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 KRT72Q14CN4 511 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 WASH2PQ6VEQ5 465 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 MILR1Q7Z6M3 343 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 SYTL1Q8IYJ3 562 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 GPBAR1Q8TDU6 330 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 WASH6PQ9NQA3 447 aa22.55■■□□□ 1.2
TSEN54-201ENST00000333213 TLR4O00206 839 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 UROSP10746 265 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 ERGP11308 486 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 GCKP35557 465 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 PNLIPRP1P54315 467 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 TBPL1P62380 186 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 LSM12Q3MHD2 195 aaKnown RBP22.54■■□□□ 1.2
TSEN54-201ENST00000333213 SUSD1Q6UWL2 747 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 WDR5BQ86VZ2 330 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 SNX31Q8N9S9 440 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 TCF7L2Q9NQB0 619 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 ZNF624Q9P2J8 865 aaPredicted RBP22.54■■□□□ 1.2
TSEN54-201ENST00000333213 BTRCQ9Y297 605 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 FANCMQ8IYD8 2048 aa22.54■■□□□ 1.2
TSEN54-201ENST00000333213 SDK1Q7Z5N4 2213 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 PIP5K1BO14986 540 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 ARL1P40616 181 aaPredicted RBP22.53■■□□□ 1.2
TSEN54-201ENST00000333213 PIK3CGP48736 1102 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 CSTF1Q05048 431 aaKnown RBP22.53■■□□□ 1.2
TSEN54-201ENST00000333213 IQCHQ86VS3 1027 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.53■■□□□ 1.2
TSEN54-201ENST00000333213 PHACTR4Q8IZ21 702 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 RGL4Q8IZJ4 473 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 C2orf73Q8N5S3 287 aaPredicted RBP22.53■■□□□ 1.2
TSEN54-201ENST00000333213 SGPP1Q9BX95 441 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 DCLRE1BQ9H816 532 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 APOBEC2Q9Y235 224 aaKnown RBP22.53■■□□□ 1.2
TSEN54-201ENST00000333213 TTC28Q96AY4 2481 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 ATP6AP2A0A1C7CYW4 349 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 TRPC5OSA6NMA1 111 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 GIPC1O14908 333 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 ATP6AP2O75787 350 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 RPN2P04844 631 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 EBLN1P0CF75 366 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 MTHFD1P11586 935 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms