RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 FAM20CQ8IXL6 584 aa25.08■■□□□ 1.61
SMDT1-201ENST00000331479 SYTL1Q8IYJ3 562 aa25.08■■□□□ 1.61
SMDT1-201ENST00000331479 ZIM3Q96PE6 472 aa25.08■■□□□ 1.61
SMDT1-201ENST00000331479 TMEM109Q9BVC6 243 aa25.08■■□□□ 1.61
SMDT1-201ENST00000331479 SCNM1Q9BWG6 230 aa25.08■■□□□ 1.61
SMDT1-201ENST00000331479 CACNA1AO00555 2505 aa25.08■■□□□ 1.61
SMDT1-201ENST00000331479 IGHV5-51A0A0C4DH38 117 aa25.07■■□□□ 1.6
SMDT1-201ENST00000331479 KRT15P19012 456 aa25.07■■□□□ 1.6
SMDT1-201ENST00000331479 PSMB5P28074 263 aa25.07■■□□□ 1.6
SMDT1-201ENST00000331479 HSD17B2P37059 387 aa25.07■■□□□ 1.6
SMDT1-201ENST00000331479 TGFBIQ15582 683 aa25.07■■□□□ 1.6
SMDT1-201ENST00000331479 SPESP1Q6UW49 350 aa25.07■■□□□ 1.6
SMDT1-201ENST00000331479 FRA10AC1Q70Z53 315 aa25.07■■□□□ 1.6
SMDT1-201ENST00000331479 ATG10Q9H0Y0 220 aa25.07■■□□□ 1.6
SMDT1-201ENST00000331479 ASPMQ8IZT6 3477 aa25.07■■□□□ 1.6
SMDT1-201ENST00000331479 A0A1W2PNU3 283 aaPredicted RBP25.06■■□□□ 1.6
SMDT1-201ENST00000331479 MT-ND3P03897 115 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 PYGBP11216 843 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 TRA2AQ13595 282 aaKnown RBP eCLIP25.06■■□□□ 1.6
SMDT1-201ENST00000331479 AGTRAPQ6RW13 159 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 SH2D5Q6ZV89 423 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 PRSS42Q7Z5A4 293 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 GPSM1Q86YR5 675 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 RIBC1Q8N443 379 aaPredicted RBP25.06■■□□□ 1.6
SMDT1-201ENST00000331479 STAG3L4Q8TBR4 150 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 SMPDL3AQ92484 453 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 ATOH8Q96SQ7 321 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 CD180Q99467 661 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 SEMA5BQ9P283 1151 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 RNF112Q9ULX5 631 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 KNTC1P50748 2209 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 KIF26BQ2KJY2 2108 aa25.06■■□□□ 1.6
SMDT1-201ENST00000331479 PABPN1LA6NDY0 278 aaKnown RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 TLCD2A6NGC4 264 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 NCF1BA6NI72 391 aaPredicted RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 NCF1CA8MVU1 366 aaPredicted RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 NCF1P14598 390 aaPredicted RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 SEPHS1P49903 392 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 TSTA3Q13630 321 aaPredicted RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 ACAP2Q15057 778 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 CNPY4Q8N129 248 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 FBXL8Q96CD0 374 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 CABS1Q96KC9 395 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 PITPNM3Q9BZ71 974 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 LGALS13Q9UHV8 139 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 PMS2P1A4D2B8 440 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 ANKRD34CP0C6C1 535 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 COL6A2P12110 1019 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 PVRP15151 417 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 H2AFXP16104 143 aaPredicted RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 CDH3P22223 829 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 OAS2P29728 719 aaKnown RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 YBX1P67809 324 aaKnown RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 CDKL1Q00532 357 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 OR2A1Q8NGT9 310 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 ACMSDQ8TDX5 336 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 EXT2Q93063 718 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 LIN37Q96GY3 246 aaPredicted RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 ACAT2Q9BWD1 397 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 STRADBQ9C0K7 418 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 KLHL25Q9H0H3 589 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 ZNF768Q9H5H4 540 aaKnown RBP25.05■■□□□ 1.6
SMDT1-201ENST00000331479 C1GALT1Q9NS00 363 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 ABCF3Q9NUQ8 709 aa25.05■■□□□ 1.6
SMDT1-201ENST00000331479 MED19A0JLT2 244 aaPredicted RBP25.04■■□□□ 1.6
SMDT1-201ENST00000331479 ZNF839A8K0R7 811 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 TMX2-CTNND1H3BSU7 103 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 TOX3O15405 576 aaPredicted RBP25.04■■□□□ 1.6
SMDT1-201ENST00000331479 KERAO60938 352 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 SNRNP200O75643 2136 aaKnown RBP25.04■■□□□ 1.6
SMDT1-201ENST00000331479 ST6GAL1P15907 406 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 NAE1Q13564 534 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 SF1Q15637 639 aaKnown RBP25.04■■□□□ 1.6
SMDT1-201ENST00000331479 C18orf21Q32NC0 220 aaPredicted RBP25.04■■□□□ 1.6
SMDT1-201ENST00000331479 RHEBL1Q8TAI7 183 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 KLHL6Q8WZ60 621 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 SLC22A18Q96BI1 424 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 GRAMD1AQ96CP6 724 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 EGFL8Q99944 293 aa25.04■■□□□ 1.6
SMDT1-201ENST00000331479 SLC9B1P1A6NJY1 282 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 PRAMEF10O60809 474 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 ANXA5P08758 320 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 HGFP14210 728 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 TBPL1P62380 186 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 CAMK2BQ13554 666 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 SLC5A12Q1EHB4 618 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 KRT71Q3SY84 523 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 TECRLQ5HYJ1 363 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 KLC3Q6P597 504 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 PYCR2Q96C36 320 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 RHBDF1Q96CC6 855 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 MED8Q96G25 268 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 MIPEPQ99797 713 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 KLHL20Q9Y2M5 609 aa25.03■■□□□ 1.6
SMDT1-201ENST00000331479 UBXN8O00124 270 aa25.02■■□□□ 1.6
SMDT1-201ENST00000331479 HGSO14964 777 aaPredicted RBP25.02■■□□□ 1.6
SMDT1-201ENST00000331479 RPA3P35244 121 aaPredicted RBP25.02■■□□□ 1.6
SMDT1-201ENST00000331479 TSNAXIP1Q2TAA8 658 aa25.02■■□□□ 1.6
SMDT1-201ENST00000331479 KIAA1614Q5VZ46 1190 aa25.02■■□□□ 1.6
SMDT1-201ENST00000331479 RAB11FIP2Q7L804 512 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms