RNA–Protein interactions for RNA: ENST00000323977.7

MRE11-202, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-202ENST00000323977 SPSB4Q96A44 273 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ZNF486Q96H40 463 aaPredicted RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 BOD1Q96IK1 185 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 PLEKHA8Q96JA3 519 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 CITED1Q99966 193 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 KIFC1Q9BW19 673 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 CACNG6Q9BXT2 260 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 LRRC3Q9BY71 257 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 PRRG3Q9BZD7 231 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 OR2B2Q9GZK3 357 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 PABPC3Q9H361 631 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 FBXO44Q9H4M3 255 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 CNIH4Q9P003 139 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 MRPL15Q9P015 296 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 C3orf18Q9UK00 162 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 DNPEPQ9ULA0 475 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ERVW-1Q9UQF0 538 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 CSADQ9Y600 493 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ZHX2Q9Y6X8 837 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TEX13CA0A0J9YWL9 993 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TRIM49BA6NDI0 452 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TTLL8A6PVC2 850 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ZNF891A8MT65 544 aaPredicted RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 TMEM238C9JI98 176 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 CCDC188H7C350 402 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 HS6ST1O60243 411 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 OPHN1O60890 802 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ENTPD3O75355 529 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ECI2O75521 394 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ZIC2O95409 532 aaPredicted RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 CH25HO95992 272 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TIMP1P01033 207 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 SERPINA5P05154 406 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 MMP3P08254 477 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 SBK2P0C263 348 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 SMIM6P0DI80 62 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 SLC2A1P11166 492 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 PEPDP12955 493 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 PRF1P14222 555 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 IL9P15248 144 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 EIF2AK2P19525 551 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 ACVR2AP27037 513 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 EPHB2P29323 1055 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 BMPR1AP36894 532 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 CDK9P50750 372 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 DGKQP52824 942 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 PKNOX1P55347 436 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ITGA1P56199 1179 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 HERVK_113P62684 666 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ERVK-24P63145 666 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TNNC1P63316 161 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 DEFA6Q01524 100 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 RING1Q06587 406 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TROAPQ12815 778 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 SF3A3Q12874 501 aaKnown RBP eCLIP4.38□□□□□ -1.71
MRE11-202ENST00000323977 MRPL49Q13405 166 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 TOP3AQ13472 1001 aaPredicted RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 TNFAIP1Q13829 316 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 HIF1AQ16665 826 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 NADK2Q4G0N4 442 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 MPPE1Q53F39 396 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 EOGTQ5NDL2 527 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 PRAMEF14Q5SWL7 426 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 PAPD7Q5XG87 772 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 SLC25A25Q6KCM7 469 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TSSK4Q6SA08 328 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 LRRC69Q6ZNQ3 347 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 VTCN1Q7Z7D3 282 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.38□□□□□ -1.71
MRE11-202ENST00000323977 SH2D3CQ8N5H7 860 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 IL17RCQ8NAC3 791 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 STEAP2Q8NFT2 490 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 RLN3Q8WXF3 142 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 C22orf15Q8WYQ4 148 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ESR2Q92731 530 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 PPP1R14AQ96A00 147 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 EXOSC8Q96B26 276 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 AP2M1Q96CW1 435 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 LRIG1Q96JA1 1093 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 SERPINB12Q96P63 405 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TGS1Q96RS0 853 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 ZNF416Q9BWM5 594 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ACE2Q9BYF1 805 aaPredicted RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 TOLLIPQ9H0E2 274 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 IGFLR1Q9H665 355 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 MAGEF1Q9HAY2 307 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ZNF302Q9NR11 478 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TLR9Q9NR96 1032 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 DUSP22Q9NRW4 184 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 ZCCHC3Q9NUD5 404 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.38□□□□□ -1.71
MRE11-202ENST00000323977 COA4Q9NYJ1 87 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 HRH3Q9Y5N1 445 aa4.38□□□□□ -1.71
MRE11-202ENST00000323977 TPRP12270 2363 aaKnown RBP4.38□□□□□ -1.71
MRE11-202ENST00000323977 TRBV23-1A0A0A0MS06 115 aa4.37□□□□□ -1.71
MRE11-202ENST00000323977 A0A1B0GV90 55 aa4.37□□□□□ -1.71
MRE11-202ENST00000323977 TRBC2A0A5B9 178 aa4.37□□□□□ -1.71
MRE11-202ENST00000323977 C5orf60A6NFR6 353 aa4.37□□□□□ -1.71
MRE11-202ENST00000323977 AQP12BA6NM10 295 aa4.37□□□□□ -1.71
MRE11-202ENST00000323977 OR6C76A6NM76 312 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms