RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 HMGCS1Q01581 520 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 SLBPQ14493 270 aaKnown RBP eCLIP10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 OTOP2Q7RTS6 562 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 LMO3Q8TAP4 145 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 C5orf34Q96MH7 638 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ZDHHC4Q9NPG8 344 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 SIX4Q9UIU6 781 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ASB3Q9Y575 518 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 PDLIM1O00151 329 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 CDC7O00311 574 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 XKP51811 444 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 CARTPTQ16568 116 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ADNP2Q6IQ32 1131 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 TNFAIP8L2Q6P589 184 aaPredicted RBP10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 TAF8Q7Z7C8 310 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 SIAH1Q8IUQ4 282 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 GPR135Q8IZ08 494 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 TTLQ8NG68 377 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 OR4C6Q8NH72 309 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 SH3RF2Q8TEC5 729 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ZSCAN5AQ9BUG6 496 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 POPDC3Q9HBV1 291 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 GIN1Q9NXP7 522 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 YIPF1Q9Y548 306 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 PDCD5O14737 125 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 WNT9AO14904 365 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 FESP07332 822 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 UBAP2Q5T6F2 1119 aaKnown RBP10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 OR4F3Q6IEY1 312 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ZCCHC12Q6PEW1 402 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 THOC6Q86W42 341 aaKnown RBP10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ZMIZ2Q8NF64 920 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 CEP295NLQ96MC4 621 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 SMOQ99835 787 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 SLC39A3Q9BRY0 314 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 NKIRAS2Q9NYR9 191 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 POFUT2Q9Y2G5 429 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 TLR4O00206 839 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 TOR1BO14657 336 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 FGF3P11487 239 aaPredicted RBP10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 VBP1P61758 197 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 MADCAM1Q13477 382 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 CRTC2Q53ET0 693 aaPredicted RBP10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 IDNKQ5T6J7 187 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ACDQ96AP0 544 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ZNF641Q96N77 438 aaPredicted RBP10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 IFT27Q9BW83 186 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 SNTG1Q9NSN8 517 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 NAV1Q8NEY1 1877 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 TYROBPO43914 113 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 CD36P16671 472 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ACVR2AP27037 513 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 IL12BP29460 328 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 SMARCD3Q6STE5 483 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 COX18Q8N8Q8 333 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 OR10H4Q8NGA5 316 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 COMMD4Q9H0A8 199 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 FLRT1Q9NZU1 646 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 CCDC59Q9P031 241 aaKnown RBP10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 LOC100130705A0A1B0GUX0 176 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 AVPR1BP47901 424 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 PLA2G16P53816 162 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 SUZ12Q15022 739 aaKnown RBP10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ZNF792Q3KQV3 632 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 AMZ2Q86W34 360 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 HDDC3Q8N4P3 179 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 STON2Q8WXE9 905 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 TMCO6Q96DC7 493 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 PYURFQ96I23 114 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 ITPAQ9BY32 194 aa10.67□□□□□ -0.7
SNRNP200-201ENST00000323853 C5P01031 1676 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 CLIC1O00299 241 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 BCAS2O75934 225 aaPredicted RBP10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 ALAS2P22557 587 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 MYBPC3Q14896 1274 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 PLEKHG6Q3KR16 790 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 ATCAYQ86WG3 371 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 KLHL36Q8N4N3 616 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 NPY6RQ99463 290 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 MGME1Q9BQP7 344 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 GKN1Q9NS71 199 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 FABP12A6NFH5 140 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 AZGP1P25311 298 aaKnown RBP10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 RBBP4Q09028 425 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 ANO7Q6IWH7 933 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 ERMP1Q7Z2K6 904 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 NUDT13Q86X67 352 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 SAMD14Q8IZD0 417 aaPredicted RBP10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 NPLOC4Q8TAT6 608 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 C7orf43Q8WVR3 580 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 GEMIN6Q8WXD5 167 aaKnown RBP10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 PAK6Q9NQU5 681 aaPredicted RBP10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 SPATA7Q9P0W8 599 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 ACTR3BQ9P1U1 418 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 P2RX2Q9UBL9 471 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 KCTD3Q9Y597 815 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 SERPINA3P01011 423 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 NATD1Q8N6N6 113 aa10.66□□□□□ -0.7
SNRNP200-201ENST00000323853 ENDOVQ8N8Q3 282 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms