RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CLEC12AQ5QGZ9 265 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 SH3PXD2AQ5TCZ1 1133 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 GATAD2BQ8WXI9 593 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 EIF2B4Q9UI10 523 aaKnown RBP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TSPAN1O60635 241 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 GOT2P00505 430 aaKnown RBP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 NCBP2P52298 156 aaKnown RBP eCLIP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 SPIN3Q5JUX0 258 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 IRGQQ8WZA9 623 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 SDCBP2Q9H190 292 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 MKKSQ9NPJ1 570 aaPredicted RBP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 CFAP97Q9P2B7 532 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 P2RX2Q9UBL9 471 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3DA0A087WVF3 549 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3IA0A087WXS9 549 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3EA0A087X179 549 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3KA0A087X1G2 549 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 A0A1W2PQH9 124 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3FA6NER0 549 aaPredicted RBP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3LB9A6J9 549 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 MSI1O43347 362 aaKnown RBP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3HP0C7X1 549 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 AHCYP23526 432 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3GQ6DHY5 549 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3CQ6IPX1 549 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 INTS5Q6P9B9 1019 aaKnown RBP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TBC1D3Q8IZP1 549 aaPredicted RBP16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 TCEAL4Q96EI5 215 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC35A5Q9BS91 424 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 EDARQ9UNE0 448 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 PLEKHA6Q9Y2H5 1048 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 A0A1B0GVM2 712 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 B4GALT4O60513 344 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 IFNA2P01563 188 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC18A2Q05940 514 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 BNIP3Q12983 259 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 CPXM1Q96SM3 734 aa16.53■□□□□ 0.24
SMCHD1-201ENST00000320876 ARPC2O15144 300 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 ESR1P03372 595 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 AIMP2Q13155 320 aaKnown RBP16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 WACQ9BTA9 647 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 SLC27A5Q9Y2P5 690 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 JCADQ9P266 1359 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 DISC1C4P0D8 188 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 M0R129 80 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 TAS2R43P59537 309 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 ANKDD1AQ495B1 522 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 ZNF709Q8N972 641 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 SMG8Q8ND04 991 aaKnown RBP16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 PADI2Q9Y2J8 665 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 IFT172Q9UG01 1749 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 ADCYAP1R1P41586 468 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 VSTM1Q6UX27 236 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 YIPF7Q8N8F6 280 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 HSPBAP1Q96EW2 488 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 C1orf21Q9H246 121 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 RPS2P15880 293 aaKnown RBP16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 NMBRP28336 390 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 PUS10Q3MIT2 529 aaKnown RBP16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 NATD1Q8N6N6 113 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 DCBLD1Q8N8Z6 715 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 BRSK1Q8TDC3 778 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 AZIN2Q96A70 460 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 MYOM1P52179 1685 aa16.52■□□□□ 0.24
SMCHD1-201ENST00000320876 ARPC4-TTLL3A0A0A6YYG9 625 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 CENPBD1B2RD01 187 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 PCCBP05166 539 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 EDNRAP25101 427 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 CYP2U1Q7Z449 544 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 FOXRED2Q8IWF2 684 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 OSTF1Q92882 214 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 TMEM209Q96SK2 561 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 SPATA7Q9P0W8 599 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 A0A1W2PRQ8 180 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 CLCA1A8K7I4 914 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 IQCF5A8MTL0 148 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 IDSP22304 550 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 PON3Q15166 354 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF404Q494X3 552 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 ANKS1BQ7Z6G8 1248 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 TBC1D14Q9P2M4 693 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 C13orf42A0A1B0GVH6 325 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 DUXAA6NLW8 204 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 WASHC1A8K0Z3 465 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 WASH3PC4AMC7 463 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 ALAS2P22557 587 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 CCR8P51685 355 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 FKBP1AP62942 108 aaKnown RBP16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 KIAA1161Q6NSJ0 714 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 WASH2PQ6VEQ5 465 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 ZNF565Q8N9K5 539 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 FAM105AQ9NUU6 356 aa16.52■□□□□ 0.23
SMCHD1-201ENST00000320876 AGLP35573 1532 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 MSCO60682 206 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ATP5A1P25705 553 aaKnown RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 NDST2P52849 883 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 CRYBB1P53674 252 aaPredicted RBP16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 TMED4Q7Z7H5 227 aa16.51■□□□□ 0.23
SMCHD1-201ENST00000320876 ENY2Q9NPA8 101 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms