RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 TTC34A8MYJ7 566 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 MATN4O95460 622 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 BOP1Q14137 746 aaKnown RBP13.86□□□□□ -0.19
PABPC1-201ENST00000318607 MS4A13Q5J8X5 152 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 SUSD1Q6UWL2 747 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 GALNT12Q8IXK2 581 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 RIMKLAQ8IXN7 391 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 HS6ST3Q8IZP7 471 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 CLECL1Q8IZS7 167 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 SLC43A3Q8NBI5 491 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 LEMD2Q8NC56 503 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 OR5K1Q8NHB7 308 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 RHOXF1Q8NHV9 184 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 OTULINQ96BN8 352 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 TFB2MQ9H5Q4 396 aaKnown RBP13.86□□□□□ -0.19
PABPC1-201ENST00000318607 LRTM1Q9HBL6 345 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 ACOT13Q9NPJ3 140 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 RPRD1BQ9NQG5 326 aaKnown RBP13.86□□□□□ -0.19
PABPC1-201ENST00000318607 NUFIP1Q9UHK0 495 aaKnown RBP13.86□□□□□ -0.19
PABPC1-201ENST00000318607 DUSP12Q9UNI6 340 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 ARIH1Q9Y4X5 557 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-201ENST00000318607 ASCC3Q8N3C0 2202 aaKnown RBP13.86□□□□□ -0.19
PABPC1-201ENST00000318607 WDR81Q562E7 1941 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 PCDHGA12O60330 932 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 TNFRSF21O75509 655 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 PRAMEF12O95522 483 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 ODC1P11926 461 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 GRK5P34947 590 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 THPOP40225 353 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 HCAR3P49019 387 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 IFITM2Q01629 132 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 SMU1Q2TAY7 513 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 TBRG1Q3YBR2 411 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 ARMCX4Q5H9R4 360 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 GDPD3Q7L5L3 318 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 THEM5Q8N1Q8 247 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 AMER2Q8N7J2 671 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 TP53I13Q8NBR0 393 aaPredicted RBP13.86□□□□□ -0.19
PABPC1-201ENST00000318607 GTF2H4Q92759 462 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 NELL1Q92832 810 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 NFKBIZQ9BYH8 718 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 ATP13A1Q9HD20 1204 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 GKN1Q9NS71 199 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 SLC6A14Q9UN76 642 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 WBP11Q9Y2W2 641 aaKnown RBP13.86□□□□□ -0.19
PABPC1-201ENST00000318607 TMEM98Q9Y2Y6 226 aa13.86□□□□□ -0.19
PABPC1-201ENST00000318607 SLC25A14O95258 325 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 SOX14O95416 240 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 STAU1O95793 577 aaKnown RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 MMP2P08253 660 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 FGF4P08620 206 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 ACPPP15309 386 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 BMPR1AP36894 532 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 CDH12P55289 794 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 DEFA1P59665 94 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 DEFA3P59666 94 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 PPP2R2BQ00005 443 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 NFE2L1Q14494 772 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 INTS6LQ5JSJ4 861 aaKnown RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 GNASQ5JWF2 1037 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 PAMR1Q6UXH9 720 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 TLK2Q86UE8 772 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 MDGA1Q8NFP4 955 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 TOR4AQ9NXH8 423 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 ARL15Q9NXU5 204 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 GTF2IRD1Q9UHL9 959 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 SLC35F4A4IF30 521 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 FAM227AF5H4B4 570 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 FGF10O15520 208 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 ZW10O43264 779 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 UPK1BO75841 260 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 ATXN1LP0C7T5 689 aaKnown RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 CASP3P42574 277 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 DBPQ10586 325 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 TAF10Q12962 218 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 CCL14Q16627 93 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 SDE2Q6IQ49 451 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 LYPD8Q6UX82 237 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 DENND1CQ8IV53 801 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 GPR65Q8IYL9 337 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 ZNF641Q96N77 438 aaPredicted RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 TYW5A2RUC4 315 aaKnown RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 ZSCAN5BA6NJL1 495 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 SAP18O00422 153 aaKnown RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 FFAR2O15552 330 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 SCNN1AP37088 669 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 GNPDA1P46926 289 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 TSTQ16762 297 aaKnown RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 ZNF691Q5VV52 312 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 BCDIN3DQ7Z5W3 292 aaKnown RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 MEX3DQ86XN8 651 aaKnown RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 BRSK1Q8TDC3 778 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 DUS3LQ96G46 650 aaKnown RBP13.85□□□□□ -0.19
PABPC1-201ENST00000318607 CLPBQ9H078 707 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 C1orf109Q9NX04 203 aa13.85□□□□□ -0.19
PABPC1-201ENST00000318607 EFCAB10A6NFE3 127 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 CRATP43155 626 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 FCGRTP55899 365 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 OR2T5Q6IEZ7 315 aa13.84□□□□□ -0.19
PABPC1-201ENST00000318607 SYCE2Q6PIF2 218 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms