RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 FOXC2Q99958 501 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 TREX2Q9BQ50 279 aaPredicted RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 SYTL2Q9HCH5 934 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 CCM2LQ9NUG4 571 aaPredicted RBP12.69□□□□□ -0.38
SYCN-201ENST00000318438 TNFRSF10DQ9UBN6 386 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 CDC23Q9UJX2 597 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 POMT2Q9UKY4 750 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 ZNF148Q9UQR1 794 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 CCDC88CQ9P219 2028 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 DOCK10Q96BY6 2186 aa12.69□□□□□ -0.38
SYCN-201ENST00000318438 AGAP14A8MT82 685 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 SOCS6O14544 535 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 UGT1A9O60656 530 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 SRP72O76094 671 aaKnown RBP12.68□□□□□ -0.38
SYCN-201ENST00000318438 IFNB1P01574 187 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 MSL3P1P0C860 447 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 PVRP15151 417 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 UGT1A6P19224 532 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 UGT1A1P22309 533 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 UGT1A4P22310 534 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 ARG2P78540 354 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 XIAPP98170 497 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 RBPJQ06330 500 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 CCNG2Q16589 344 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 MRPL14Q6P1L8 145 aaKnown RBP12.68□□□□□ -0.38
SYCN-201ENST00000318438 DRICH1Q6PGQ1 229 aaPredicted RBP12.68□□□□□ -0.38
SYCN-201ENST00000318438 CDHR3Q6ZTQ4 885 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 LINC00523Q86TU6 105 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 TMEM200AQ86VY9 491 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 OR13C4Q8NGS5 318 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 UGT1A7Q9HAW7 530 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 UGT1A10Q9HAW8 530 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 UGT1A8Q9HAW9 530 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 C1GALT1Q9NS00 363 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 PLA2G3Q9NZ20 509 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 ABI3Q9P2A4 366 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 DHCR7Q9UBM7 475 aaKnown RBP12.68□□□□□ -0.38
SYCN-201ENST00000318438 SLC24A2Q9UI40 661 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 FKBPLQ9UIM3 349 aa12.68□□□□□ -0.38
SYCN-201ENST00000318438 DNMT3AQ9Y6K1 912 aaPredicted RBP12.68□□□□□ -0.38
SYCN-201ENST00000318438 GSAPA4D1B5 854 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 H7C0S8 307 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 FGGP02679 453 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 CD63P08962 238 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 ITGALP20701 1170 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 MMP11P24347 488 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 AKT1P31749 480 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 FDFT1P37268 417 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 CTSCP53634 463 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 SNX1Q13596 522 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 NFE2L1Q14494 772 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 INAQ16352 499 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 LONRF2Q1L5Z9 754 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 NKAIN1Q4KMZ8 207 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 RHBDD2Q6NTF9 364 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 TMEM220Q6QAJ8 160 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 GPR135Q8IZ08 494 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 CCDC89Q8N998 374 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 RASGEF1AQ8N9B8 481 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 OR4E2Q8NGC2 313 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 LMF1Q96S06 567 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 INSM2Q96T92 566 aaPredicted RBP12.67□□□□□ -0.38
SYCN-201ENST00000318438 SPRTNQ9H040 489 aaPredicted RBP12.67□□□□□ -0.38
SYCN-201ENST00000318438 ASB8Q9H765 288 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 PAK5Q9P286 719 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 HS3ST3B1Q9Y662 390 aa12.67□□□□□ -0.38
SYCN-201ENST00000318438 TRAV17A0A0B4J275 112 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 KLHL33A6NCF5 533 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 HCRTR1O43613 425 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 SUN1O94901 812 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 F10P00742 488 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 CTSBP07858 339 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 MSH3P20585 1137 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 TNFSF10P50591 281 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 CDH17Q12864 832 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 PRKAA1Q13131 559 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 POU6F1Q14863 301 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 LONRF1Q17RB8 773 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 DEFB110Q30KQ9 67 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 METRNLQ641Q3 311 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 KIRREL2Q6UWL6 708 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 SNX20Q7Z614 316 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 TAB3Q8N5C8 712 aaPredicted RBP12.66□□□□□ -0.38
SYCN-201ENST00000318438 SPATA3Q8NHX4 192 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 STYXQ8WUJ0 223 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 ZFPM2Q8WW38 1151 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 ULK4Q96C45 1275 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 DNAJC1Q96KC8 554 aaKnown RBP12.66□□□□□ -0.38
SYCN-201ENST00000318438 C12orf66Q96MD2 445 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 NRTNQ99748 197 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 MESP1Q9BRJ9 268 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 AP1M1Q9BXS5 423 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 KIR3DX1Q9H7L2 352 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 ETNK1Q9HBU6 452 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 GPAMQ9HCL2 828 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 NLE1Q9NVX2 485 aaPredicted RBP12.66□□□□□ -0.38
SYCN-201ENST00000318438 CRLS1Q9UJA2 301 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 MEMO1Q9Y316 297 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 JRKLQ9Y4A0 524 aa12.66□□□□□ -0.38
SYCN-201ENST00000318438 FN1P02751 2386 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms