RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CYP2U1Q7Z449 544 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 SYVN1Q86TM6 617 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 OSTM1Q86WC4 334 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 CCDC28AQ8IWP9 274 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 CARNMT1Q8N4J0 409 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 NKAPQ8N5F7 415 aaKnown RBP7.37□□□□□ -1.23
CDHR3-201ENST00000317716 TMEM125Q96AQ2 219 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 TEX37Q96LM6 180 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 SMIM14Q96QK8 99 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.37□□□□□ -1.23
CDHR3-201ENST00000317716 SERHL2Q9H4I8 314 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 MEAF6Q9HAF1 191 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 SERHLQ9NQF3 203 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 ARMC1Q9NVT9 282 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 FBXW11Q9UKB1 542 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 SSR3Q9UNL2 185 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 PCDHGA11Q9Y5H2 935 aa7.37□□□□□ -1.23
CDHR3-201ENST00000317716 PRAMEF33A0A0G2JMD5 474 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 F5H5T6 163 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 M0QX08 132 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 PRAMEF10O60809 474 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 FAM163BP0C2L3 166 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 TCF3P15923 654 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 MYL12AP19105 171 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 GPX3P22352 226 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 AXLP30530 894 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 TALDO1P37837 337 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 KCNC1P48547 511 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 MASP1P48740 699 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 RHOAP61586 193 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 IRF8Q02556 426 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 RPL6Q02878 288 aaKnown RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ADPRMQ3LIE5 342 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 BCL7AQ4VC05 210 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 USP39Q53GS9 565 aaKnown RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 LCN8Q6JVE9 175 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 BLOC1S3Q6QNY0 202 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 DEF8Q6ZN54 512 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 USP43Q70EL4 1123 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 PEX5LQ8IYB4 626 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 TMEM199Q8N511 208 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ATP6V0D2Q8N8Y2 350 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 OR6C4Q8NGE1 309 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SH3KBP1Q96B97 665 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 GPR78Q96P69 363 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 YTHDF1Q9BYJ9 559 aaKnown RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 GSTO2Q9H4Y5 243 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 TBC1D17Q9HA65 648 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 PLSCR3Q9NRY6 295 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 CLN6Q9NWW5 311 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 C1orf109Q9NX04 203 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 GPR83Q9NYM4 423 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 H2AFY2Q9P0M6 372 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 RCOR3Q9P2K3 495 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ENPP5Q9UJA9 477 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SNX7Q9UNH6 387 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ZNF197O14709 1029 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 MATN3O15232 486 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 GPR39O43194 453 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 OR1I1O60431 355 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 OTCP00480 354 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 RHOCP08134 193 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 PFKMP08237 780 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 CHRNB1P11230 501 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ODC1P11926 461 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 DNAJB2P25686 324 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 PSMA1P25786 263 aaKnown RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 PSEN2P49810 448 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 CTBSQ01459 385 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 PFKPQ01813 784 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 PLEKHG6Q3KR16 790 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 POM121L1PQ3SYA9 428 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SYTL3Q4VX76 610 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 CATSPEREQ5SY80 951 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ERICH5Q6P6B1 374 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 BHLHB9Q6PI77 547 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 GPRIN1Q7Z2K8 1008 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 CYP4Z1Q86W10 505 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 LRRC17Q8N6Y2 441 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 OR4F6Q8NGB9 312 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SNAPC3Q92966 411 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 RTP4Q96DX8 246 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ZNF641Q96N77 438 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 MTERF1Q99551 399 aaKnown RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 FAM126AQ9BYI3 521 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 POLR2J2Q9GZM3 115 aaKnown RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 NSUN3Q9H649 340 aaKnown RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 POLR3BQ9NW08 1133 aaPredicted RBP7.36□□□□□ -1.23
CDHR3-201ENST00000317716 TAS2R16Q9NYV7 291 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 VPS28Q9UK41 221 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 ADAMTS5Q9UNA0 930 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 TMEM98Q9Y2Y6 226 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 MAP4K5Q9Y4K4 846 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 PCDHB14Q9Y5E9 798 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 A0A1W2PQH9 124 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 SNTNA6NMZ2 147 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 FADS2P1A8MWK0 482 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 FAM220BPB1ANY3 271 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 CHURC1-FNTBB4DL54 471 aa7.36□□□□□ -1.23
CDHR3-201ENST00000317716 E9PAM4 449 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms