RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PLA2G15Q8NCC3 412 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ISG20Q96AZ6 181 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RNF145Q96MT1 663 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 MCCC1Q96RQ3 725 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 EFHD1Q9BUP0 239 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 INTS7Q9NVH2 962 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ZDHHC3Q9NYG2 299 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 WARS2Q9UGM6 360 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 CD300AQ9UGN4 299 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 HCN2Q9UL51 889 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PCDHB1Q9Y5F3 818 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 H3BQ06 376 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RAD51BO15315 384 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 LZTS3O60299 673 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 NOBOXO60393 691 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RSL1D1O76021 490 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PCDH8O95206 1070 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 LRATO95237 230 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 S100BP04271 92 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RPS17P08708 135 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 G6PDP11413 515 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SLC2A4P14672 509 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 EFNA1P20827 205 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 DDX6P26196 483 aaKnown RBP eCLIP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 MAP4P27816 1152 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 GJA4P35212 333 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 BMXP51813 675 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SH3BGRP55822 239 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 C21orf59P57076 290 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RPL26P61254 145 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 NFKB2Q00653 900 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PRKG2Q13237 762 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 NR1D2Q14995 579 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 LAPTM4AQ15012 233 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 GAB4Q2WGN9 574 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PTCHD3Q3KNS1 767 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SAMD4BQ5PRF9 694 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 IER5LQ5T953 404 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 BRAT1Q6PJG6 821 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 TMEM220Q6QAJ8 160 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RAVER1Q8IY67 606 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 CFAP206Q8IYR0 622 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 CENPSQ8N2Z9 138 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SFRP1Q8N474 314 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 OR56A4Q8NGH8 313 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 CDC26Q8NHZ8 85 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 TBC1D15Q8TC07 691 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 GANCQ8TET4 914 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ARRDC3Q96B67 414 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ULK4Q96C45 1275 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 FAM83CQ9BQN1 747 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ACAT2Q9BWD1 397 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 LGR4Q9BXB1 951 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 POPDC3Q9HBV1 291 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 POLE4Q9NR33 117 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SACM1LQ9NTJ5 587 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 TMEM181Q9P2C4 612 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 OPTCQ9UBM4 332 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 BLOC1S6Q9UL45 172 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 OR1A2Q9Y585 309 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 A0A087WXM4 84 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 TRBV5-4A0A0C4DH59 114 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SH3PXD2BA1X283 911 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 FXYD1O00168 92 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SLC9A3R1O14745 358 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 WDR47O94967 919 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PAK4O96013 591 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RB1P06400 928 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 OR56A5P0C7T3 313 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 TCF3P15923 654 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 HMOX2P30519 316 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 HOXA9P31269 272 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SHMT2P34897 504 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 BDKRB1P46663 353 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 CSNK1DP48730 415 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 HYAL1Q12794 435 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 TMEM115Q12893 351 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 NFYCQ13952 458 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 HERC3Q15034 1050 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 MAPK11Q15759 364 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 DUSP6Q16828 381 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 AP5B1Q2VPB7 878 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ZNF284Q2VY69 593 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 GPR33Q49SQ1 333 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PAGE3Q5JUK9 113 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ADAMTSL2Q86TH1 951 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ETFBKMTQ8IXQ9 262 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RBM12BQ8IXT5 1001 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RHBDF1Q96CC6 855 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PLEKHA8Q96JA3 519 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 MUS81Q96NY9 551 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 MTERF1Q99551 399 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 TRMOQ9BU70 441 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SLC25A23Q9BV35 468 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ACTR8Q9H981 624 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PLGRKTQ9HBL7 147 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 FAIMQ9NVQ4 179 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 CLDND1Q9NY35 253 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PKD2L2Q9NZM6 624 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms