RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 AQP12AQ8IXF9 295 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 ZNF101Q8IZC7 436 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 LMLNQ96KR4 655 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 OR51V1Q9H2C8 321 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 MIA3Q5JRA6 1907 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 ZNF14P17017 642 aaPredicted RBP15.17■□□□□ 0.02
HCFC1-201ENST00000310441 MMP8P22894 467 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 CXCR1P25024 350 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 ARSJQ5FYB0 599 aaPredicted RBP15.17■□□□□ 0.02
HCFC1-201ENST00000310441 RPL13AP3Q6NVV1 102 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 C7orf61Q8IZ16 206 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 ZNF670-ZNF695F2Z2N8 137 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 ATG12O94817 140 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 GNSP15586 552 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 CD36P16671 472 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 CRHR2Q13324 411 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 LPCAT4Q643R3 524 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 CYP2S1Q96SQ9 504 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 SYT4Q9H2B2 425 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 SRMSQ9H3Y6 488 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 TCAF1Q9Y4C2 921 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 AHCYP23526 432 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 HTR2AP28223 471 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 ZBED5Q49AG3 693 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 USP50Q70EL3 339 aaPredicted RBP15.17■□□□□ 0.02
HCFC1-201ENST00000310441 INSIG1O15503 277 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 HSPA12AO43301 675 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 RPS2P15880 293 aaKnown RBP15.17■□□□□ 0.02
HCFC1-201ENST00000310441 GRM5P41594 1212 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 SLC5A3P53794 718 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 RPL7AP62424 266 aaKnown RBP15.17■□□□□ 0.02
HCFC1-201ENST00000310441 GAL3ST4Q96RP7 486 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 COMMD3Q9UBI1 195 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 NPIPA5E9PKD4 350 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 RNASEH2AO75792 299 aaKnown RBP15.17■□□□□ 0.02
HCFC1-201ENST00000310441 VEGFAP15692 232 aaPredicted RBP15.17■□□□□ 0.02
HCFC1-201ENST00000310441 SHMT1P34896 483 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 CRISP1P54107 249 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 MOB2Q70IA6 237 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 TMEM126BQ8IUX1 230 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 RIOK2Q9BVS4 552 aaKnown RBP15.17■□□□□ 0.02
HCFC1-201ENST00000310441 NPIPA1Q9UND3 350 aa15.17■□□□□ 0.02
HCFC1-201ENST00000310441 A0A1W2PRQ8 180 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 PCCBP05166 539 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 ITGA5P08648 1049 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 HOXD8P13378 290 aaPredicted RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 MAXP61244 160 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 SCGB2B2Q4G0G5 96 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 LCLAT1Q6UWP7 414 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 SPATA6LQ8N4H0 392 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 NOP16Q9Y3C1 178 aaKnown RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 SCGB1D2O95969 90 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 CBSLP0DN79 551 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 CBSP35520 551 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 NCBP2P52298 156 aaKnown RBP eCLIP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 KLHL15Q96M94 604 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 HIPK3Q9H422 1215 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 NAV1Q8NEY1 1877 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 SLC15A5A6NIM6 579 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 KCNU1A8MYU2 1149 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 CDK14O94921 469 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 NOMO1Q15155 1222 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 ARL13AQ5H913 290 aaPredicted RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 SEC14L1Q92503 715 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 KATNBL1Q9H079 304 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 NLGN3Q9NZ94 848 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 GLDCP23378 1020 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 PSMD8P48556 350 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 MLLT6P55198 1093 aaPredicted RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 PPP1R26Q5T8A7 1209 aaPredicted RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 FOXR1Q6PIV2 292 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 NUDT13Q86X67 352 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 OR5J2Q8NH18 312 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 ELP5Q8TE02 316 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 CD180Q99467 661 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 LPIN3Q9BQK8 851 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 ASPNQ9BXN1 380 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 ADAM7Q9H2U9 754 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 UBQLN2Q9UHD9 624 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 SHOX2O60902 331 aaPredicted RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 BMP8BP34820 402 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 BMP8AQ7Z5Y6 402 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 YIPF7Q8N8F6 280 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 POF1BQ8WVV4 589 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 SLC5A7Q9GZV3 580 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 PTBP2Q9UKA9 531 aaKnown RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 RBMX2Q9Y388 322 aaKnown RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 TESMINQ9Y4I5 508 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 CNTNAP1P78357 1384 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 FAM237AA0A1B0GTK4 181 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 HLA-DPB1P04440 258 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 ITGB1P05556 798 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 ERCC1P07992 297 aaPredicted RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 MRPL49Q13405 166 aaKnown RBP15.16■□□□□ 0.02
HCFC1-201ENST00000310441 LRRN1Q6UXK5 716 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 MBOAT1Q6ZNC8 495 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 KIAA0319LQ8IZA0 1049 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 MTFR1LQ9H019 292 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 FAM83DQ9H4H8 585 aa15.16■□□□□ 0.02
HCFC1-201ENST00000310441 FBXW2Q9UKT8 454 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms