RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 TNFSF9P41273 254 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 C9orf57Q5W0N0 161 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 SLC30A8Q8IWU4 369 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 TMCO6Q96DC7 493 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 IRF2BPLQ9H1B7 796 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 CNTNAP1P78357 1384 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 DAPL1A0PJW8 107 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 SYN1P17600 705 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 LHCGRP22888 699 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 MLLT1Q03111 559 aaPredicted RBP12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 AVL9Q8NBF6 648 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 GAB3Q8WWW8 586 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 EZH1Q92800 747 aaPredicted RBP12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 ZNF347Q96SE7 839 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 ACP6Q9NPH0 428 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 SH3BGRL2Q9UJC5 107 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 PLLPQ9Y342 182 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 TIMM22Q9Y584 194 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 hCG_2039718K7EN88 272 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 HSPA7P48741 367 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 GHRHRQ02643 423 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 SNIP1Q8TAD8 396 aaKnown RBP12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 SLC22A18Q96BI1 424 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 PIWIL1Q96J94 861 aaKnown RBP12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 HIPK2Q9H2X6 1198 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 B4GALT7Q9UBV7 327 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 MAGEB17A8MXT2 336 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 CLDN25C9JDP6 229 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 SHOXO15266 292 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 GADD45GO95257 159 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 BPGMP07738 259 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 PKMP14618 531 aaKnown RBP12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 OTOP3Q7RTS5 596 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 TRIM43Q96BQ3 446 aaPredicted RBP12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 IL17RBQ9NRM6 502 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 IL36AQ9UHA7 158 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 PLA2G16P53816 162 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 TARDBPQ13148 414 aaKnown RBP eCLIP12.62□□□□□ -0.393e-8■■■■□ 26.4
SPTBN2-201ENST00000309996 CLEC6AQ6EIG7 209 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 TMEM220Q6QAJ8 160 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 PHB2Q99623 299 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 PTGES2Q9H7Z7 377 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 IPPKQ9H8X2 491 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 ARID1BQ8NFD5 2236 aaPredicted RBP12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 SSX5O60225 188 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 BRINP1O60477 761 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 CXCL9Q07325 125 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 DSG2Q14126 1118 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 INTS5Q6P9B9 1019 aaKnown RBP12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 TOP6BLQ8N6T0 577 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 FAM83DQ9H4H8 585 aa12.62□□□□□ -0.39
SPTBN2-201ENST00000309996 CNTRLQ7Z7A1 2325 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 KCNU1A8MYU2 1149 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 MSI1O43347 362 aaKnown RBP12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 LAMTOR5O43504 91 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 PRAMEF1O95521 474 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ALPPP05187 535 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 IFNGR1P15260 489 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 RAB30Q15771 203 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 AADACL4Q5VUY2 407 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 OGFOD2Q6N063 350 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 SLC26A9Q7LBE3 791 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ZNF100Q8IYN0 542 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 OR6N1Q8NGY5 312 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 GCDHQ92947 438 aaPredicted RBP12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 SLC35G5Q96KT7 338 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 CARS2Q9HA77 564 aaKnown RBP12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 FAM105AQ9NUU6 356 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 MALT1Q9UDY8 824 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ZNF180Q9UJW8 692 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ABCG2Q9UNQ0 655 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 HIF3AQ9Y2N7 669 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ACSL1P33121 698 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 NCBP2P52298 156 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 PNLIPRP1P54315 467 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 AMZ2Q86W34 360 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 NETO2Q8NC67 525 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ZBED6CLQ96FA7 236 aaPredicted RBP12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ADAD1Q96M93 576 aaKnown RBP12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ASPNQ9BXN1 380 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ERVK-5Q9HDB9 667 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ARL8BQ9NVJ2 186 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 A0A1W2PPL8 197 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 E9PAM4 449 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ASLP04424 464 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 RAB4AP20338 218 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ECT2LQ008S8 904 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 DMRTB1Q96MA1 342 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 HIF1ANQ9NWT6 349 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 MTMR10Q9NXD2 777 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 FTSJ1Q9UET6 329 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 APOL3O95236 402 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 GBA3Q9H227 469 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 ANKRA2Q9H9E1 313 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 DNAAF2Q9NVR5 837 aaKnown RBP12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 EFCAB9A8MZ26 197 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 AGPSO00116 658 aa12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 FARS2O95363 451 aaKnown RBP12.61□□□□□ -0.39
SPTBN2-201ENST00000309996 CCR8P51685 355 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms