RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 MPDZO75970 2070 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 GRID2O43424 1007 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 WDR47O94967 919 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 EFEMP2O95967 443 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TGFB1P01137 390 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 HOXB3P14651 431 aaPredicted RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 CCR7P32248 378 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 CRHR1P34998 444 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 RPIAP49247 311 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 EPHA5P54756 1037 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 RCN1Q15293 331 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TLR1Q15399 786 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TBCELQ5QJ74 424 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 C6orf10Q5SRN2 563 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 ANKRD26P1Q6NSI1 321 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 UGT3A1Q6NUS8 523 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 ZNF549Q6P9A3 640 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TTC23LQ6PF05 361 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 RALGPS2Q86X27 583 aaPredicted RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 CILP2Q8IUL8 1156 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 CHERPQ8IWX8 916 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 OR2T3Q8NH03 318 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 OR1E3Q8WZA6 343 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TANKQ92844 425 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 E2F7Q96AV8 911 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 TSGA13Q96PP4 275 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 PHF12Q96QT6 1004 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 SORBS1Q9BX66 1292 aaKnown RBP4.82□□□□□ -1.64
CAST-201ENST00000309190 C12orf49Q9H741 205 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 MANSC1Q9H8J5 431 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 S100A14Q9HCY8 104 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 SOX13Q9UN79 622 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 NEUROG3Q9Y4Z2 214 aa4.82□□□□□ -1.64
CAST-201ENST00000309190 ADGRG4Q8IZF6 3080 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 MAGEA13PA6NCF6 341 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 A8MUA0 341 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 IFRD1O00458 451 aaPredicted RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 DNAJA2O60884 412 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 NTRK1P04629 796 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 CYP2A6P11509 494 aaPredicted RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 CPA3P15088 417 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 ZNF26P17031 533 aaPredicted RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 DDX5P17844 614 aaKnown RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 NPY2RP49146 381 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 AIF1P55008 147 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 DLG1Q12959 904 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 INO80DQ53TQ3 878 aaPredicted RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 C1orf189Q5VU69 101 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 TMEM154Q6P9G4 183 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 FAM83HQ6ZRV2 1179 aaPredicted RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 AMZ2Q86W34 360 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 ANKRD46Q86W74 232 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 ZC3HC1Q86WB0 502 aaKnown RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 SDR16C5Q8N3Y7 309 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 TMEM105Q8N8V8 129 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 OR52B6Q8NGF0 335 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 PNPT1Q8TCS8 783 aaKnown RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 THAP3Q8WTV1 239 aaPredicted RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 TFGQ92734 400 aaPredicted RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 GLYATL1Q969I3 302 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 SLCO4A1Q96BD0 722 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 NSL1Q96IY1 281 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 TGM7Q96PF1 710 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 EBF4Q9BQW3 602 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 WWP1Q9H0M0 922 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 CASS4Q9NQ75 786 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 VPS45Q9NRW7 570 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 FARSBQ9NSD9 589 aaKnown RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 TAC3Q9UHF0 121 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 IKZF3Q9UKT9 509 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 WDR37Q9Y2I8 494 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 ST14Q9Y5Y6 855 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 CEPT1Q9Y6K0 416 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 MAU2Q9Y6X3 613 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 PKD1L2Q7Z442 2459 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 COL4A2P08572 1712 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 TMEM221A6NGB7 291 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 ENO4A6NNW6 628 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 SLC16A8O95907 504 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 S1PR4O95977 384 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 GSNP06396 782 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 APOA4P06727 396 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 MYL2P10916 166 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 EEF1DP29692 281 aaKnown RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 HMGCLP35914 325 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 PRKAG1P54619 331 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 EIF4EBP2Q13542 120 aaPredicted RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 FASTKQ14296 549 aaKnown RBP4.81□□□□□ -1.64
CAST-201ENST00000309190 NAA25Q14CX7 972 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 EOGTQ5NDL2 527 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 PDPK2PQ6A1A2 396 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 KLC3Q6P597 504 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 TMEM207Q6UWW9 146 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 CLEC4FQ8N1N0 589 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 NXPE1Q8N323 547 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 OR10Q1Q8NGQ4 319 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 GAB3Q8WWW8 586 aa4.81□□□□□ -1.64
CAST-201ENST00000309190 TUBGCP3Q96CW5 907 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms