RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ABATP80404 500 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 RBM39Q14498 530 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ADGRF1Q5T601 910 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 FSTL4Q6MZW2 842 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 FIGNL1Q6PIW4 674 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 THOC6Q86W42 341 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 TMC8Q8IU68 726 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ZZZ3Q8IYH5 903 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 SGCDQ92629 289 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 PRAP1Q96NZ9 151 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 FUCA2Q9BTY2 467 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 DTLQ9NZJ0 730 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 HEBP2Q9Y5Z4 205 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 A0A1W2PQU0 124 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 TGM5O43548 720 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 RPL3P39023 403 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 MRPS35P82673 323 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 IER5LQ5T953 404 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 TRIM73Q86UV7 250 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 PROKR2Q8NFJ6 384 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 PCDHGB3Q9Y5G1 929 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 DHRS12A0PJE2 317 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 MEIS3P2A8K0S8 358 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 NME6O75414 186 aaPredicted RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 GADD45GO95257 159 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 SERPINA3P01011 423 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 L1CAMP32004 1257 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CDKN2BP42772 138 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ENPP2Q13822 863 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 LAPTM4AQ15012 233 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 TAB1Q15750 504 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 EMC10Q5UCC4 262 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 Q6ZVL8 140 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 TAS1R1Q7RTX1 841 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 MSL3Q8N5Y2 521 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 C1orf52Q8N6N3 182 aaKnown RBP7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CKAP2Q8WWK9 683 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ANKRD7Q92527 254 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 IGSF21Q96ID5 467 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 CA5BQ9Y2D0 317 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 ARHGAP23Q9P227 1491 aa7.63□□□□□ -1.19
SCN9A-201ENST00000303354 TMEM233B4DJY2 109 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 HAPLN1P10915 354 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 SLC35F1Q5T1Q4 408 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TTC9BQ8N6N2 239 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 ZHX1-C8orf76Q96EF9 292 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 SERINC1Q9NRX5 453 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 GIMAP2Q9UG22 337 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 CORO2BQ9UQ03 480 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 PIAS3Q9Y6X2 628 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 MTHFD1P11586 935 aaKnown RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 IL1R2P27930 398 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 NSG1P42857 185 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 MS4A13Q5J8X5 152 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TTC27Q6P3X3 843 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 KCNA7Q96RP8 456 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 SPHK2Q9NRA0 654 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 CXXC1Q9P0U4 656 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 SALL4Q9UJQ4 1053 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TBC1D24Q9ULP9 559 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 FAM170BA6NMN3 283 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 DGKQP52824 942 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 PRR22Q8IZ63 422 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 CPSF7Q8N684 471 aaKnown RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 OR6N1Q8NGY5 312 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 GAL3ST3Q96A11 431 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 LRRC39Q96DD0 335 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 MCCC1Q96RQ3 725 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 ZIC5Q96T25 663 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 C17orf62Q9BQA9 187 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TMEM175Q9BSA9 504 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 MCOLN1Q9GZU1 580 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 RHOJQ9H4E5 214 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TMCO1Q9UM00 188 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 PHLPP1O60346 1717 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 SOX1O00570 391 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 OR1I1O60431 355 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 MPIP34949 423 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TSPAN5P62079 268 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 SPIRE1Q08AE8 756 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 HEPACAMQ14CZ8 416 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TMEFF1Q8IYR6 380 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 FSTL5Q8N475 847 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TRIM39Q9HCM9 518 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 IFT46Q9NQC8 304 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 ERVK-18Q9QC07 812 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TRIM64BA6NI03 449 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 C2CD4BA6NLJ0 364 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 MAGEB17A8MXT2 336 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 IRAK2O43187 625 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 PTGER1P34995 402 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 LRRC49Q8IUZ0 686 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 OR2AP1Q8NGE2 309 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 OR8K3Q8NH51 312 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 NFKBIDQ8NI38 313 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 ADAMTS19Q8TE59 1207 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 COL21A1Q96P44 957 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 PKP4Q99569 1192 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 GPR88Q9GZN0 384 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms