RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 RGS10O43665 173 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 CTSKP43235 329 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 RPL26P61254 145 aaKnown RBP13.72□□□□□ -0.21
SDC2-201ENST00000302190 CYP2A13Q16696 494 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ARMC4Q5T2S8 1044 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 ANKFN1Q8N957 763 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 RAB2BQ8WUD1 216 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 NELL1Q92832 810 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 SCAMP4Q969E2 229 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 EGLN2Q96KS0 407 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 PSKH2Q96QS6 385 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 TCF25Q9BQ70 676 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 NUSAP1Q9BXS6 441 aaKnown RBP13.72□□□□□ -0.21
SDC2-201ENST00000302190 SGK2Q9HBY8 427 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 DYRK4Q9NR20 520 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 SLC25A13Q9UJS0 675 aa13.72□□□□□ -0.21
SDC2-201ENST00000302190 COCHO43405 550 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 TULP3O75386 442 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 RASAL1O95294 804 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 ENO2P09104 434 aaPredicted RBP13.71□□□□□ -0.21
SDC2-201ENST00000302190 TNFRSF1BP20333 461 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 MAGEA12P43365 314 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 HKDC1Q2TB90 917 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 NHSL2Q5HYW2 709 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 CMTM8Q8IZV2 173 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 SVOPQ8N4V2 548 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 FAM86B1Q8N7N1 296 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 KCNN1Q92952 543 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 ATOH8Q96SQ7 321 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 WRAP53Q9BUR4 548 aaKnown RBP13.71□□□□□ -0.21
SDC2-201ENST00000302190 LHPPQ9H008 270 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.71□□□□□ -0.215e-8■□□□□ 10
SDC2-201ENST00000302190 TRIM64CA6NLI5 447 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 CLIC1O00299 241 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 ANXA4P09525 319 aaPredicted RBP13.71□□□□□ -0.21
SDC2-201ENST00000302190 HOXD8P13378 290 aaPredicted RBP13.71□□□□□ -0.21
SDC2-201ENST00000302190 BMXP51813 675 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 DEFA1P59665 94 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 DEFA3P59666 94 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 TUBA4AP68366 448 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 EPS8Q12929 822 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 COLEC12Q5KU26 742 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 MYEOVQ96EZ4 313 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 MRM3Q9HC36 420 aaKnown RBP13.71□□□□□ -0.21
SDC2-201ENST00000302190 TOR4AQ9NXH8 423 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 RABL2BQ9UNT1 228 aa13.71□□□□□ -0.21
SDC2-201ENST00000302190 CD36P16671 472 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 ENGP17813 658 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 RPS3AP61247 264 aaKnown RBP13.71□□□□□ -0.22
SDC2-201ENST00000302190 CAMK2GQ13555 558 aaPredicted RBP13.71□□□□□ -0.22
SDC2-201ENST00000302190 TP53BP2Q13625 1128 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 TBPL2Q6SJ96 375 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 CYP2U1Q7Z449 544 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 TSPAN33Q86UF1 283 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 LMNTD1Q8N9Z9 388 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 UBASH3BQ8TF42 649 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 PHF10Q8WUB8 498 aaKnown RBP13.71□□□□□ -0.22
SDC2-201ENST00000302190 MAGEE1Q9HCI5 957 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 ABCB8Q9NUT2 735 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 NLE1Q9NVX2 485 aaPredicted RBP13.71□□□□□ -0.22
SDC2-201ENST00000302190 ZIM2Q9NZV7 527 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 ERVK-18Q9QC07 812 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 MTRRQ9UBK8 725 aa13.71□□□□□ -0.22
SDC2-201ENST00000302190 TRIM24O15164 1050 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 ATXN1LP0C7T5 689 aaKnown RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 CKBP12277 381 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 SLC6A4P31645 630 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 SPAM1P38567 509 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 SNRPD1P62314 119 aaKnown RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 TXNL4AP83876 142 aaKnown RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 HIST2H2ACQ16777 129 aaPredicted RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 HIST2H2AA3Q6FI13 130 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 CNTN4Q8IWV2 1026 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 PEX5LQ8IYB4 626 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 HJURPQ8NCD3 748 aaPredicted RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 OR2T11Q8NH01 316 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 PROKR1Q8TCW9 393 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 IL4I1Q96RQ9 567 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 SEZ6LQ9BYH1 1024 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 RHCGQ9UBD6 479 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 PCDHGA8Q9Y5G5 932 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 STATHP02808 62 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 CD47Q08722 323 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 TAB1Q15750 504 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 C6orf141Q5SZD1 244 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 CPTPQ5TA50 214 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 HMGN2P46Q86SG4 172 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 LEMD2Q8NC56 503 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 C7orf57Q8NEG2 295 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 OR4K1Q8NGD4 311 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 FAR1Q8WVX9 515 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 STARD8Q92502 1023 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 L3HYPDHQ96EM0 354 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 CDK5RAP1Q96SZ6 601 aaKnown RBP13.7□□□□□ -0.22
SDC2-201ENST00000302190 CSNK1G1Q9HCP0 422 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 AGPAT4Q9NRZ5 378 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 VPS51Q9UID3 782 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 DYRK1BQ9Y463 629 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 PCDHB1Q9Y5F3 818 aa13.7□□□□□ -0.22
SDC2-201ENST00000302190 GPR45Q9Y5Y3 372 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms