RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 ADRA1BP35368 520 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 MAP3K8P41279 467 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 ZNF81P51508 661 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 NFATC4Q14934 902 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 FAM76BQ5HYJ3 339 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 KIF18BQ86Y91 864 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 COX18Q8N8Q8 333 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 PROKR2Q8NFJ6 384 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 OR6Q1Q8NGQ2 317 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 SKA1Q96BD8 255 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 C7orf50Q9BRJ6 194 aaKnown RBP12.11□□□□□ -0.47
ABCA3-201ENST00000301732 IL1RAPQ9NPH3 570 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 OR2S2Q9NQN1 319 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 OTOL1A6NHN0 477 aaPredicted RBP12.11□□□□□ -0.47
ABCA3-201ENST00000301732 L7N2F9 121 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 TGFB3P10600 412 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 RPL35P42766 123 aaKnown RBP12.11□□□□□ -0.47
ABCA3-201ENST00000301732 UFM1P61960 85 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 VAMP2P63027 116 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 SCARB2Q14108 478 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 DSC3Q14574 896 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 UBXN11Q5T124 520 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 ANO7Q6IWH7 933 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 OTOP2Q7RTS6 562 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 ARL14EPQ8N8R7 260 aaPredicted RBP12.11□□□□□ -0.47
ABCA3-201ENST00000301732 POLR2J3Q9H1A7 115 aaKnown RBP12.11□□□□□ -0.47
ABCA3-201ENST00000301732 GBA3Q9H227 469 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 MEAF6Q9HAF1 191 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 ITGB1BP2Q9UKP3 347 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 AP3M1Q9Y2T2 418 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 RIPK3Q9Y572 518 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 VILLO15195 856 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 VIPP01282 170 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 ENGP17813 658 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 SOX2P48431 317 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 PRPF38BQ5VTL8 546 aaKnown RBP12.11□□□□□ -0.47
ABCA3-201ENST00000301732 SSX6Q7RTT6 188 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 ZNF558Q96NG5 402 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 AGXT2Q9BYV1 514 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 ZNF451Q9Y4E5 1061 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 WASH3PC4AMC7 463 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 KLK1P06870 262 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 IQCCQ4KMZ1 466 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 RABL3Q5HYI8 236 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 TMEM151AQ8N4L1 468 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 NFKBIDQ8NI38 313 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 C10orf82Q8WW14 230 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 AASSQ9UDR5 926 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 C12orf71A8MTZ7 269 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 FARS2O95363 451 aaKnown RBP12.11□□□□□ -0.47
ABCA3-201ENST00000301732 FAM180BQ6P0A1 224 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 CNIH3Q8TBE1 160 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 SGCDQ92629 289 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 OTUB2Q96DC9 234 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 KCNN2Q9H2S1 579 aa12.11□□□□□ -0.47
ABCA3-201ENST00000301732 PREX2Q70Z35 1606 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 A0A1W2PRQ8 180 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 PPEF2O14830 753 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 MAFO75444 373 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 CDH4P55283 916 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 ILF3Q12906 894 aaKnown RBP eCLIP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 PRSS55Q6UWB4 352 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 HID1Q8IV36 788 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 HSFY1Q96LI6 401 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 SLC22A4Q9H015 551 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 AKTIPQ9H8T0 292 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 TCAF1Q9Y4C2 921 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 ISPDA4D126 451 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 ADAMTS3O15072 1205 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 TLX2O43763 284 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 TMEM63AO94886 807 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 RPS12P25398 132 aaKnown RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 PTGIRP43119 386 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 GLUD2P49448 558 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 WDR4P57081 412 aaKnown RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 CD47Q08722 323 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 CRTC1Q6UUV9 634 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 JPH3Q8WXH2 748 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 MAFIPQ8WZ33 124 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 OR8D1Q8WZ84 308 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 NUDT15Q9NV35 164 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 FZD4Q9ULV1 537 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 CDC42BPBQ9Y5S2 1711 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 ARPC2O15144 300 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 NUPL2O15504 423 aaKnown RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 TREHO43280 583 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 PPP1R11O60927 126 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 LIMK2P53671 638 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 NFKB2Q00653 900 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 MEF2AQ02078 507 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 POTEHQ6S545 545 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 ZFP41Q8N8Y5 198 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 GATSQ8NAP1 163 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 GTF3C2Q8WUA4 911 aaPredicted RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 RFT1Q96AA3 541 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 ADAD1Q96M93 576 aaKnown RBP12.1□□□□□ -0.47
ABCA3-201ENST00000301732 TMEM134Q9H6X4 195 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 MOCS1Q9NZB8 636 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 PTTG2Q9NZH5 202 aa12.1□□□□□ -0.47
ABCA3-201ENST00000301732 HYKKA2RU49 373 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms