RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.44□□□□□ -1.54
PATL1-201ENST00000300146 MCUQ8NE86 351 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 GRK7Q8WTQ7 553 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 PYROXD1Q8WU10 500 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 EEF1AKMT1Q8WVE0 214 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 TADA1Q96BN2 335 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 HIST1H2AHQ96KK5 128 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 HIST1H2AJQ99878 128 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 SELENOSQ9BQE4 189 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 H2AFJQ9BTM1 129 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 SLC25A23Q9BV35 468 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 TSSK1BQ9BXA7 367 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 PRORYQ9H606 182 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 ARL15Q9NXU5 204 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 NEU2Q9Y3R4 380 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 HEBP2Q9Y5Z4 205 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 UTP20O75691 2785 aaKnown RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 A0A0A6YYC8 382 aaPredicted RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 MKRN2OSH3BPM6 223 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 I3L1I5 382 aaPredicted RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 PEX12O00623 359 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 LIN7AO14910 233 aaPredicted RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 CPNE3O75131 537 aaKnown RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 VPS26AO75436 327 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 CAPNS1P04632 268 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 ITGA1P56199 1179 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 ATP1A4Q13733 1029 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 TCEAL1Q15170 157 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 ASB18Q6ZVZ8 466 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 FBXO36Q8NEA4 188 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 PRR7Q8TB68 274 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 LINGO1Q96FE5 620 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 SCARF2Q96GP6 870 aaPredicted RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 TSPAN10Q9H1Z9 355 aaPredicted RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 RYDENQ9NUL5 291 aaKnown RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 CUEDC1Q9NWM3 386 aaPredicted RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 HCN3Q9P1Z3 774 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 FEZ2Q9UHY8 353 aaPredicted RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 CDC23Q9UJX2 597 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 POLHQ9Y253 713 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 SLC16A5O15375 505 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 ZSCAN9O15535 394 aaPredicted RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 CREG1O75629 220 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 TCP1P17987 556 aaKnown RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 RAB8AP61006 207 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 RHDQ02161 417 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 ABHD18Q0P651 414 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 HIF1AQ16665 826 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 IRAK1BP1Q5VVH5 260 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 CAPRIN2Q6IMN6 1127 aaKnown RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 FRMPD2BQ6IN97 320 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 LRRC8BQ6P9F7 803 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 PPIL6Q8IXY8 311 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 ADGRF3Q8IZF5 1079 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 SIRT6Q8N6T7 355 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 C19orf47Q8N9M1 422 aaKnown RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 LINC01555Q8NAE3 123 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 C9orf43Q8TAL5 461 aaPredicted RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 UBXN4Q92575 508 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 FATE1Q969F0 183 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 PPP1R2P1Q96PQ5 205 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 SLC25A18Q9H1K4 315 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 ARNT2Q9HBZ2 717 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 MRPS30Q9NP92 439 aaKnown RBP5.44□□□□□ -1.54
PATL1-201ENST00000300146 C1GALT1Q9NS00 363 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 HOMER3Q9NSC5 361 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 CTSFQ9UBX1 484 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 PCYOX1Q9UHG3 505 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 PCDHGA7Q9Y5G6 932 aa5.44□□□□□ -1.54
PATL1-201ENST00000300146 F8W8V4 182 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 ZNHIT1O43257 154 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 FAM155BO75949 473 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 RHOXF2BP0C7M4 288 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 PNLIPP16233 465 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 SHMT2P34897 504 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 RAB28P51157 221 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 TUBB4BP68371 445 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 CDC20Q12834 499 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 MSLNQ13421 630 aaPredicted RBP5.43□□□□□ -1.54
PATL1-201ENST00000300146 TRA2AQ13595 282 aaKnown RBP eCLIP5.43□□□□□ -1.545e-7■■□□□ 14.5
PATL1-201ENST00000300146 TUBB2AQ13885 445 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 C18orf21Q32NC0 220 aaPredicted RBP5.43□□□□□ -1.54
PATL1-201ENST00000300146 FRA10AC1Q70Z53 315 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 STRA8Q7Z7C7 330 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 C17orf82Q86X59 251 aaPredicted RBP5.43□□□□□ -1.54
PATL1-201ENST00000300146 CISD2Q8N5K1 135 aaKnown RBP5.43□□□□□ -1.54
PATL1-201ENST00000300146 RHOXF2Q9BQY4 288 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 TUBB2BQ9BVA1 445 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 MVB12BQ9H7P6 319 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 DRG1Q9Y295 367 aaKnown RBP5.43□□□□□ -1.54
PATL1-201ENST00000300146 SSUH2Q9Y2M2 353 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 ABCA4P78363 2273 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 TNRC6BQ9UPQ9 1833 aaKnown RBP5.43□□□□□ -1.54
PATL1-201ENST00000300146 PLXND1Q9Y4D7 1925 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 MROH6A6NGR9 719 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 ARHGEF33A8MVX0 844 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 POC1B-GALNT4F8VUJ3 575 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 J3QKU1 62 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 B4GALT2O60909 372 aa5.43□□□□□ -1.54
PATL1-201ENST00000300146 ACSL3O95573 720 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms