RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 PNPLA2Q96AD5 504 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 C19orf60Q96EN9 201 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 GPN2Q9H9Y4 310 aaPredicted RBP6.96□□□□□ -1.3
RAG1-201ENST00000299440 MKKSQ9NPJ1 570 aaPredicted RBP6.96□□□□□ -1.3
RAG1-201ENST00000299440 PRDM8Q9NQV8 689 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 EGFL7Q9UHF1 273 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 CENPXA8MT69 81 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 K7ERQ8 282 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 GSC2O15499 205 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 RSL1D1O76021 490 aaKnown RBP6.96□□□□□ -1.3
RAG1-201ENST00000299440 OGNP20774 298 aaKnown RBP6.96□□□□□ -1.3
RAG1-201ENST00000299440 MSX1P28360 303 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 PBX2P40425 430 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 PTPN5P54829 565 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 SIM1P81133 766 aaPredicted RBP6.96□□□□□ -1.3
RAG1-201ENST00000299440 ANKRD54Q6NXT1 300 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 SHISA6Q6ZSJ9 500 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 CCDC103Q8IW40 242 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 TEX19Q8NA77 164 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 OR5AK3PQ8NH89 298 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 DOK4Q8TEW6 326 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 SNX33Q8WV41 574 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 CMTM7Q96FZ5 175 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 ACSL5Q9ULC5 683 aa6.96□□□□□ -1.3
RAG1-201ENST00000299440 LOC100506127A0A0U1RQW1 187 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 LINC01553A4QN01 128 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 PRAMEF26H0Y7S4 382 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 PIRO00625 290 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 LIN7AO14910 233 aaPredicted RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 PROS1P07225 676 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 RNF144AP50876 292 aaPredicted RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 C3orf38Q5JPI3 329 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 TAS1R1Q7RTX1 841 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 HDDC2Q7Z4H3 204 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 GPR141Q7Z602 305 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 THOC6Q86W42 341 aaKnown RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 RALGPS2Q86X27 583 aaPredicted RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 DNAJC9Q8WXX5 260 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 FATE1Q969F0 183 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 NTAN1Q96AB6 310 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 AGAP2Q99490 1192 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 CLSTN3Q9BQT9 956 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 TTYH1Q9H313 450 aaPredicted RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 PHF11Q9UIL8 331 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.95□□□□□ -1.3
RAG1-201ENST00000299440 GMPPBQ9Y5P6 360 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 H3BUI4 141 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 EIF1AYO14602 144 aaKnown RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 GP1BBP13224 206 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 RCAN2Q14206 197 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 BTBD16Q32M84 506 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 ARMCX4Q5H9R4 360 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 LIX1LQ8IVB5 337 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 ZNF433Q8N7K0 673 aaPredicted RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 OR6K6Q8NGW6 343 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 OR6Y1Q8NGX8 325 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 SLC47A1Q96FL8 570 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 CASD1Q96PB1 797 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 PLGRKTQ9HBL7 147 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 PPP4R1LQ9P1A2 415 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 TPRKBQ9Y3C4 175 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 GPR37L1O60883 481 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 CBLP22681 906 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 RPS3AP61247 264 aaKnown RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 PLP2Q04941 152 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 PDZK1Q5T2W1 519 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 UBAP2Q5T6F2 1119 aaKnown RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 TMEM198Q66K66 360 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 KIAA0408Q6ZU52 694 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 TAS1R3Q7RTX0 852 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 HORMAD2Q8N7B1 307 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 TERB1Q8NA31 727 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 CHST4Q8NCG5 386 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 CKAP2Q8WWK9 683 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 ASB15Q8WXK1 588 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 CDKN2AIPNLQ96HQ2 116 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 ZNF641Q96N77 438 aaPredicted RBP6.95□□□□□ -1.3
RAG1-201ENST00000299440 EFCAB11Q9BUY7 163 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 DUSP23Q9BVJ7 150 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 LRMDAQ9H2I8 198 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 STMN3Q9NZ72 180 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 LRCH1Q9Y2L9 728 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 FAM237AA0A1B0GTK4 181 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 A0A1W2PRB8 838 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 CDC14CA4D256 554 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 E7EQ34 232 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 TMX2-CTNND1H3BSU7 103 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 STX16-NPEPL1H3BU86 382 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 STX16O14662 325 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 SLC7A4O43246 635 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 HSD11B1P28845 292 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 GMFBP60983 142 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 NFKB2Q00653 900 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 ZNF234Q14588 700 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 SNAPC1Q16533 368 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 PTCHD4Q6ZW05 846 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 EXOC3L1Q86VI1 746 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 SVOPQ8N4V2 548 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 DIO2Q92813 273 aa6.95□□□□□ -1.3
RAG1-201ENST00000299440 SLC38A4Q969I6 547 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms