RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 VPS26BQ4G0F5 336 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 OXR1Q8N573 874 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 OR56A3Q8NH54 315 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 B4GALNT2Q8NHY0 566 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 ROPN1LQ96C74 230 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 SIPA1Q96FS4 1042 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 C1QTNF7Q9BXJ2 289 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 OSBPL6Q9BZF3 934 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 ELOVL6Q9H5J4 265 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 PREBQ9HCU5 417 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 PHPT1Q9NRX4 125 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-202ENST00000297979 INTS7Q9NVH2 962 aaKnown RBP13.85□□□□□ -0.19
C9orf3-202ENST00000297979 FZD4Q9ULV1 537 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 SLC2A4P14672 509 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 ACADLP28330 430 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 THOP1P52888 689 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 UFM1P61960 85 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 RPL38P63173 70 aaKnown RBP13.85□□□□□ -0.19
C9orf3-202ENST00000297979 HMGCS1Q01581 520 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 CHIT1Q13231 466 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 MAD2L1Q13257 205 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-202ENST00000297979 RCAN2Q14206 197 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 CCDC6Q16204 474 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 MAP7D1Q3KQU3 841 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 RFTN2Q52LD8 501 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-202ENST00000297979 SLC44A4Q53GD3 710 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 COQ5Q5HYK3 327 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 IER5LQ5T953 404 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 IL23RQ5VWK5 629 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 RETREG3Q86VR2 466 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 HORMAD1Q86X24 394 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 RGL4Q8IZJ4 473 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 SELENOMQ8WWX9 145 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 SPDL1Q96EA4 605 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 TEX37Q96LM6 180 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-202ENST00000297979 SLC17A9Q9BYT1 436 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 OR52A5Q9H2C5 316 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 PACSIN3Q9UKS6 424 aa13.85□□□□□ -0.19
C9orf3-202ENST00000297979 POLR3HQ9Y535 204 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-202ENST00000297979 DNMT3AQ9Y6K1 912 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-202ENST00000297979 F5P12259 2224 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 PRAMEF4O60810 478 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 PDYNP01213 254 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 JUPP14923 745 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 GNPDA1P46926 289 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 IRF8Q02556 426 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TMED1Q13445 227 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 ZNF423Q2M1K9 1284 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 PRAMEF9Q5VWM5 478 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 LIPJQ5W064 366 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 UNC5DQ6UXZ4 953 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 PDZD3Q86UT5 571 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 KBTBD6Q86V97 674 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 SLC7A5P1Q8MH63 180 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 JADE3Q92613 823 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 N4BP2L2Q92802 583 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-202ENST00000297979 SLC45A3Q96JT2 553 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 CROTQ9UKG9 612 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TNRC18O15417 2968 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3DA0A087WVF3 549 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3IA0A087WXS9 549 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3EA0A087X179 549 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3KA0A087X1G2 549 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3FA6NER0 549 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3LB9A6J9 549 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 KMOO15229 486 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3HP0C7X1 549 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 G6PDP11413 515 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 GLULP15104 373 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 ZFP36L2P47974 494 aaKnown RBP13.84□□□□□ -0.19
C9orf3-202ENST00000297979 CEACAM7Q14002 265 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3GQ6DHY5 549 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3CQ6IPX1 549 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 CYP20A1Q6UW02 462 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 LAYNQ6UX15 382 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 USP30Q70CQ3 517 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 TBC1D3Q8IZP1 549 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-202ENST00000297979 PPFIBP2Q8ND30 876 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 RPLP0P6Q8NHW5 317 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 MTFMTQ96DP5 389 aaKnown RBP13.84□□□□□ -0.19
C9orf3-202ENST00000297979 ACPTQ9BZG2 426 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 ZDHHC5Q9C0B5 715 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 LRTM1Q9HBL6 345 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 SLC52A3Q9NQ40 469 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 ADA2Q9NZK5 511 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 SLC23A2Q9UGH3 650 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 EIF3LQ9Y262 564 aaKnown RBP13.84□□□□□ -0.19
C9orf3-202ENST00000297979 NCKAP1Q9Y2A7 1128 aa13.84□□□□□ -0.19
C9orf3-202ENST00000297979 FAM234BA2RU67 622 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 ASGR2P07307 311 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 ERFP50548 548 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 POLR2JP52435 117 aaKnown RBP13.83□□□□□ -0.19
C9orf3-202ENST00000297979 FBXO43Q4G163 708 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 EOGTQ5NDL2 527 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 C8orf82Q6P1X6 216 aaPredicted RBP13.83□□□□□ -0.19
C9orf3-202ENST00000297979 ANKK1Q8NFD2 765 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 OR9A1PQ8NGU1 263 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 PROKR1Q8TCW9 393 aa13.83□□□□□ -0.19
C9orf3-202ENST00000297979 ZNF480Q8WV37 535 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms