RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 PIP5K1BO14986 540 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 NIPSNAP2O75323 286 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 LEFTY1O75610 366 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 GATBO75879 557 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ZNF20P17024 532 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 CBFBQ13951 182 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 CARTPTQ16568 116 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 FIP1L1Q6UN15 594 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.77□□□□□ -1.331e-6■■□□□ 13.8
GAPVD1-202ENST00000297933 AMIGO2Q86SJ2 522 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 SATL1Q86VE3 508 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 LNX2Q8N448 690 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 OR7A2PQ8NGA2 310 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 SLC13A3Q8WWT9 602 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 RFKQ969G6 155 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 PYCR2Q96C36 320 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 MMABQ96EY8 250 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ZSWIM3Q96MP5 696 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TMEM209Q96SK2 561 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 HBEGFQ99075 208 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 LMAN1LQ9HAT1 526 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 USP29Q9HBJ7 922 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ERVK-5Q9HDB9 667 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TMEM248Q9NWD8 314 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 B4GALT7Q9UBV7 327 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 APOBEC3BQ9UH17 382 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ACSL5Q9ULC5 683 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 PPM1HQ9ULR3 514 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 DHRS7Q9Y394 339 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 A0A0U1RQJ8 604 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ANKRD66B4E2M5 251 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 PRAMEF12O95522 483 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 PAK4O96013 591 aaPredicted RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 KLK1P06870 262 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 SRPRAP08240 638 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 DBTP11182 482 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 CHRNB2P17787 502 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 ITGA3P26006 1051 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 NTSR1P30989 418 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 DMPKQ09013 629 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 C1orf61Q13536 156 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 SPIN4Q56A73 249 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 HFE2Q6ZVN8 426 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 LRP10Q7Z4F1 713 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 GALNTL5Q7Z4T8 443 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 DCUN1D3Q8IWE4 304 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 RHBDD1Q8TEB9 315 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 RC3H2Q9HBD1 1191 aaKnown RBP6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TSC22D4Q9Y3Q8 395 aa6.77□□□□□ -1.33
GAPVD1-202ENST00000297933 TP53I11O14683 189 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 TNFRSF10BO14763 440 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 NPC1O15118 1278 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 OAS1P00973 400 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 NUDT17P0C025 328 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 LINGO3P0C6S8 592 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 GP1BBP13224 206 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 YAP1P46937 504 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 KCNJ2P63252 427 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 CSTF1Q05048 431 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 SCRN3Q0VDG4 424 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 OLFML2AQ68BL7 652 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 REP15Q6BDI9 236 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 TRABD2AQ86V40 505 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 FUKQ8N0W3 1084 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 RASGEF1CQ8N431 466 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 AMER2Q8N7J2 671 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 ZSCAN4Q8NAM6 433 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 SNRNP27Q8WVK2 155 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 SGCDQ92629 289 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 EZH1Q92800 747 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 PMM1Q92871 262 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 ZNF641Q96N77 438 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 NELL2Q99435 816 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 LRMDAQ9H2I8 198 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 FARSBQ9NSD9 589 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 ZCCHC3Q9NUD5 404 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 RAPGEFL1Q9UHV5 662 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 PIK3C2AO00443 1686 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 XRN1Q8IZH2 1706 aaKnown RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 H3BQ06 376 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 H3BUI4 141 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 ONECUT3O60422 494 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 PLIN3O60664 434 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 ANPEPP15144 967 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 AP1S2P56377 157 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 VSX2P58304 361 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 HNRNPKP61978 463 aaKnown RBP eCLIP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 RIPK1Q13546 671 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 ANKRD22Q5VYY1 191 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 NCBP2-AS2Q69YL0 99 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 DNM1P34Q6PK57 102 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 SYVN1Q86TM6 617 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 SPPL2CQ8IUH8 684 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 OR10Q1Q8NGQ4 319 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 CDKN2AIPNLQ96HQ2 116 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 ASPNQ9BXN1 380 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 MUC13Q9H3R2 512 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 IFT80Q9P2H3 777 aaPredicted RBP6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 VPS29Q9UBQ0 182 aa6.76□□□□□ -1.33
GAPVD1-202ENST00000297933 ZNF180Q9UJW8 692 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms