RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 CDCA4Q9BXL8 241 aa13.9□□□□□ -0.18
FUBP1-201ENST00000294623 TMPRSS4Q9NRS4 437 aa13.9□□□□□ -0.18
FUBP1-201ENST00000294623 CNOT2Q9NZN8 540 aaKnown RBP13.9□□□□□ -0.18
FUBP1-201ENST00000294623 POLHQ9Y253 713 aa13.9□□□□□ -0.18
FUBP1-201ENST00000294623 CSNK1G3Q9Y6M4 447 aa13.9□□□□□ -0.18
FUBP1-201ENST00000294623 A8MV72 311 aaPredicted RBP13.89□□□□□ -0.19
FUBP1-201ENST00000294623 PPP6CO00743 305 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 SLC9A3R1O14745 358 aaPredicted RBP13.89□□□□□ -0.19
FUBP1-201ENST00000294623 PCDHGA12O60330 932 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 TSPAN12O95859 305 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 LGI1O95970 557 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 MT-CYBP00156 380 aaPredicted RBP13.89□□□□□ -0.19
FUBP1-201ENST00000294623 HMBSP08397 361 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 CYP2A6P11509 494 aaPredicted RBP13.89□□□□□ -0.19
FUBP1-201ENST00000294623 CD9P21926 228 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 PTBP1P26599 531 aaKnown RBP eCLIP13.89□□□□□ -0.19
FUBP1-201ENST00000294623 HOXC13P31276 330 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 TAB1Q15750 504 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 EML3Q32P44 896 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 LRIF1Q5T3J3 769 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 C10orf62Q5T681 223 aaPredicted RBP13.89□□□□□ -0.19
FUBP1-201ENST00000294623 LIMS2Q7Z4I7 341 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 AMIGO1Q86WK6 493 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 KIF18BQ86Y91 864 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 ZZZ3Q8IYH5 903 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 CYP4Z2PQ8N1L4 340 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 YIPF7Q8N8F6 280 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 PPP1R13LQ8WUF5 828 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 Q96MT0 163 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 TRIM62Q9BVG3 475 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 UCK2Q9BZX2 261 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 OR51E2Q9H255 320 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 SEMA4BQ9NPR2 832 aaPredicted RBP13.89□□□□□ -0.19
FUBP1-201ENST00000294623 OSER1Q9NX31 292 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 TMPRSS11EQ9UL52 423 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 MAN2B2Q9Y2E5 1009 aa13.89□□□□□ -0.19
FUBP1-201ENST00000294623 A8MVJ9 347 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 TRIM77I1YAP6 450 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 PER2O15055 1255 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 CYP7B1O75881 506 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 C9P02748 559 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 SEMG1P04279 462 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 FABP3P05413 133 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 UQCRC1P31930 480 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 ITGA1P56199 1179 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 WNT3AP56704 352 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 PSPHP78330 225 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 PITX1P78337 314 aaPredicted RBP13.88□□□□□ -0.19
FUBP1-201ENST00000294623 RBBP7Q16576 425 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 SMN1Q16637 294 aaKnown RBP13.88□□□□□ -0.19
FUBP1-201ENST00000294623 BTBD16Q32M84 506 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 MZT2BQ6NZ67 158 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 MSANTD1Q6ZTZ1 278 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 STX19Q8N4C7 294 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 EFHBQ8N7U6 833 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 CPPED1Q9BRF8 314 aaPredicted RBP13.88□□□□□ -0.19
FUBP1-201ENST00000294623 CHCHD6Q9BRQ6 235 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 CENPOQ9BU64 300 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 ACTL8Q9H568 366 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 CATSPERBQ9H7T0 1116 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 TIGARQ9NQ88 270 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 OR12D3Q9UGF7 316 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 IKZF3Q9UKT9 509 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 CMAHPQ9Y471 501 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 COL4A4P53420 1690 aaPredicted RBP13.88□□□□□ -0.19
FUBP1-201ENST00000294623 SYNJ2BP-COX16A0A087WUM0 186 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 A0A096LPI6 279 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 A0A1W2PQ09 198 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 SH3D21A4FU49 640 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 PLD2O14939 933 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 USP2O75604 605 aaPredicted RBP13.88□□□□□ -0.19
FUBP1-201ENST00000294623 SERPINI2O75830 405 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 EDNRBP24530 442 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 GZMMP51124 257 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 CREMQ03060 361 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 EN1Q05925 392 aaPredicted RBP13.88□□□□□ -0.19
FUBP1-201ENST00000294623 CAMK2GQ13555 558 aaPredicted RBP13.88□□□□□ -0.19
FUBP1-201ENST00000294623 ZBTB6Q15916 424 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 GNASQ5JWF2 1037 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 ZBTB37Q5TC79 503 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 CACHD1Q5VU97 1274 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 Q6ZSR9 355 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 GPALPP1Q8IXQ4 340 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 TMEM132CQ8N3T6 1108 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 ENKURQ8TC29 256 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 GGHQ92820 318 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 C8orf48Q96LL4 319 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 COLEC11Q9BWP8 271 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 REEP1Q9H902 201 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 VNN3Q9NY84 501 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 PDP1Q9P0J1 537 aaPredicted RBP13.88□□□□□ -0.19
FUBP1-201ENST00000294623 COX16Q9P0S2 106 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 ENOPH1Q9UHY7 261 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 AGO1Q9UL18 857 aaKnown RBP13.88□□□□□ -0.19
FUBP1-201ENST00000294623 PCDHGA6Q9Y5G7 932 aa13.88□□□□□ -0.19
FUBP1-201ENST00000294623 TUBAL3A6NHL2 446 aa13.87□□□□□ -0.19
FUBP1-201ENST00000294623 ECI2O75521 394 aa13.87□□□□□ -0.19
FUBP1-201ENST00000294623 GLP2RO95838 553 aa13.87□□□□□ -0.19
FUBP1-201ENST00000294623 HLA-DQB1P01920 261 aa13.87□□□□□ -0.19
FUBP1-201ENST00000294623 G6PDP11413 515 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms