RNA–Protein interactions for RNA: ENST00000292535.11

CUX1-201, Transcript of cut like homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CUX1, Length 13,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-201ENST00000292535 ZNF451Q9Y4E5 1061 aa9.15□□□□□ -0.94
CUX1-201ENST00000292535 PREX1Q8TCU6 1659 aa9.15□□□□□ -0.94
CUX1-201ENST00000292535 TUBA3CQ13748 450 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 DEFB132Q7Z7B7 95 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 ARHGAP12Q8IWW6 846 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 KIAA1143Q96AT1 154 aaPredicted RBP9.15□□□□□ -0.95
CUX1-201ENST00000292535 SLC7A6OSQ96CW6 309 aaPredicted RBP9.15□□□□□ -0.95
CUX1-201ENST00000292535 CITED4Q96RK1 184 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 PHB2Q99623 299 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 ACBD6Q9BR61 282 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 SERTAD3Q9UJW9 196 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 EPHB6O15197 1021 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 ENTPD6O75354 484 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 RAB36O95755 333 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 GTF2IRD1Q9UHL9 959 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 OR8H1Q8NGG4 311 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 NKD2Q969F2 451 aaPredicted RBP9.15□□□□□ -0.95
CUX1-201ENST00000292535 C7orf26Q96N11 449 aa9.15□□□□□ -0.95
CUX1-201ENST00000292535 NECAB3Q96P71 396 aaPredicted RBP9.15□□□□□ -0.95
CUX1-201ENST00000292535 VIRMAQ69YN4 1812 aaKnown RBP9.15□□□□□ -0.95
CUX1-201ENST00000292535 PEX12O00623 359 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 ZNF12P17014 697 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 CHIT1Q13231 466 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 VMACQ2NL98 169 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 VITQ6UXI7 678 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 SLC9B2Q86UD5 537 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 SPPL2CQ8IUH8 684 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 OR56A1Q8NGH5 318 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 KAT8Q9H7Z6 458 aaKnown RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 MARCH7Q9H992 704 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 KIAA2026Q5HYC2 2103 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 CCDC85CA6NKD9 419 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 DISC1C4P0D8 188 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 MATN2O00339 956 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 PCDHGA12O60330 932 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 TAL1P17542 331 aaPredicted RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 DNAJA1P31689 397 aaKnown RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 GJA8P48165 433 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 NFKB2Q00653 900 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 UNQ6126/PRO20091Q6UXV3 157 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 RALGPS2Q86X27 583 aaPredicted RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 TUBGCP5Q96RT8 1024 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 PLCE1Q9P212 2302 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 ASTN1O14525 1302 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 GOT2P00505 430 aaKnown RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 MMP8P22894 467 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 ABCG1P45844 678 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 CDK10Q15131 360 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 TMIEQ8NEW7 156 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 ABCD2Q9UBJ2 740 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 SEC14L4Q9UDX3 406 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 ICAM3P32942 547 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 RYKP34925 604 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 TIGD4Q8IY51 512 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 TOMM5Q8N4H5 51 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 MFSD2AQ8NA29 543 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 GPR152Q8TDT2 470 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 COL6A1P12109 1028 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 GP1BBP13224 206 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 HERV-K104P61576 105 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 C6orf52Q5T4I8 152 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 OGFRL1Q5TC84 451 aaPredicted RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 TMCO2Q7Z6W1 182 aaPredicted RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 CEP76Q8TAP6 659 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 TDP1Q9NUW8 608 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 PLEKHA6Q9Y2H5 1048 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 CDH10Q9Y6N8 788 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 ITGB1P05556 798 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 ARHGEF4Q9NR80 690 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 BLOC1S4Q9NUP1 217 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 B4GALT7Q9UBV7 327 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 PCDHGB6Q9Y5F9 930 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 ANXA8P13928 327 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 FUT10Q6P4F1 479 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 CHERPQ8IWX8 916 aaKnown RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 OR10G2Q8NGC3 310 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 GRHL1Q9NZI5 618 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 PADI2Q9Y2J8 665 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 MID1O15344 667 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 H1F0P07305 194 aaKnown RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 ERCC1P07992 297 aaPredicted RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 RIN1Q13671 783 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 PUM1Q14671 1186 aaKnown RBP eCLIP9.14□□□□□ -0.953e-7■■□□□ 11.4
CUX1-201ENST00000292535 EGFLAMQ63HQ2 1017 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 MFSD5Q6N075 450 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 TRABD2AQ86V40 505 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 NR4A3Q92570 626 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 MECRQ9BV79 373 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 MRPL49Q13405 166 aaKnown RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 ASTE1Q2TB18 679 aaPredicted RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 NXPE1Q8N323 547 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 P2RY11Q96G91 374 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 A0A0G2JPF8 293 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 HNRNPCL3B7ZW38 293 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 HNRNPCL4P0DMR1 293 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 SLC2A2P11168 524 aaPredicted RBP9.14□□□□□ -0.95
CUX1-201ENST00000292535 EPCAMP16422 314 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 S100A12P80511 92 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 OR8H3Q8N146 312 aa9.14□□□□□ -0.95
CUX1-201ENST00000292535 MTMR10Q9NXD2 777 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms