RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SLC32A1Q9H598 525 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 RMI1Q9H9A7 625 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 MARCH5Q9NX47 278 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 LMCD1Q9NZU5 365 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 TRPC4Q9UBN4 977 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 CNOT11Q9UKZ1 510 aaKnown RBP15.5■□□□□ 0.07
SMAD6-201ENST00000288840 ANK1P16157 1881 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 NDUFS2O75306 463 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 TCF3P15923 654 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 ALOX12P18054 663 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 HRH2P25021 359 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 SPIBQ01892 262 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 UBE3AQ05086 875 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 FOXM1Q08050 763 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 CD47Q08722 323 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 NPTX1Q15818 432 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 SLC36A3Q495N2 470 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 PYCR3Q53H96 274 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 CPTPQ5TA50 214 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 SCML4Q8N228 414 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 SMYD1Q8NB12 490 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 STON2Q8WXE9 905 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 POLE4Q9NR33 117 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 CTPS2Q9NRF8 586 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 ADPRHL2Q9NX46 363 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 USE1Q9NZ43 259 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 SRRDQ9UH36 339 aa15.5■□□□□ 0.07
SMAD6-201ENST00000288840 CFAP20Q9Y6A4 193 aaKnown RBP15.5■□□□□ 0.07
SMAD6-201ENST00000288840 IGLV3-10A0A075B6K4 115 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 OR7A17O14581 309 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 CXCL14O95715 111 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 S100A5P33763 92 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 TRPC1P48995 793 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 MTA1Q13330 715 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 GPRC6AQ5T6X5 926 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 HEATR4Q86WZ0 1026 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 CROCCP3Q8IVE0 287 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 RAVER1Q8IY67 606 aaKnown RBP15.49■□□□□ 0.07
SMAD6-201ENST00000288840 CLIP4Q8N3C7 705 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 C1orf52Q8N6N3 182 aaKnown RBP15.49■□□□□ 0.07
SMAD6-201ENST00000288840 SETD9Q8NE22 299 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 ZHX1-C8orf76Q96EF9 292 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 PLEKHA8Q96JA3 519 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 IKZF5Q9H5V7 419 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 CLEC4EQ9ULY5 219 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 MAGEB17A8MXT2 336 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 LSM1O15116 133 aaKnown RBP15.49■□□□□ 0.07
SMAD6-201ENST00000288840 SCELO95171 688 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 POLR2EP19388 210 aaKnown RBP15.49■□□□□ 0.07
SMAD6-201ENST00000288840 BDKRB1P46663 353 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 GANABQ14697 944 aaKnown RBP15.49■□□□□ 0.07
SMAD6-201ENST00000288840 C6orf141Q5SZD1 244 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 SUSD1Q6UWL2 747 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 LZICQ8WZA0 190 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 MCMBPQ9BTE3 642 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 MUC13Q9H3R2 512 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 TPK1Q9H3S4 243 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 FAM118AQ9NWS6 357 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 ZNF638Q14966 1978 aaKnown RBP15.49■□□□□ 0.07
SMAD6-201ENST00000288840 SUV39H1O43463 412 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 TPST2O60704 377 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 MATN1P21941 496 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 SMARCB1Q12824 385 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 TMEM236Q5W0B7 351 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 FRG2Q64ET8 278 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 OR4A15Q8NGL6 344 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 CASD1Q96PB1 797 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 FRG2BQ96QU4 278 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 RIOK2Q9BVS4 552 aaKnown RBP15.49■□□□□ 0.07
SMAD6-201ENST00000288840 ELOVL2Q9NXB9 296 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 DYRK1BQ9Y463 629 aa15.49■□□□□ 0.07
SMAD6-201ENST00000288840 ANKDD1BA6NHY2 528 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 H0Y858 1186 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 BMP10O95393 424 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 TPP2P29144 1249 aaPredicted RBP15.48■□□□□ 0.07
SMAD6-201ENST00000288840 GPC1P35052 558 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 CDH12P55289 794 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 TLE2Q04725 743 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 CAMK2GQ13555 558 aaPredicted RBP15.48■□□□□ 0.07
SMAD6-201ENST00000288840 AADATQ8N5Z0 425 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 CHST14Q8NCH0 376 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 BCL7CQ8WUZ0 217 aaPredicted RBP15.48■□□□□ 0.07
SMAD6-201ENST00000288840 ASZ1Q8WWH4 475 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 PEX13Q92968 403 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 TCF25Q9BQ70 676 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 ASAH2Q9NR71 780 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 ERVK-18Q9QC07 812 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 CD247P20963 164 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 SERPINB1P30740 379 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 POLR2LP62875 67 aaKnown RBP15.48■□□□□ 0.07
SMAD6-201ENST00000288840 DNASE1L3Q13609 305 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 PLEKHG6Q3KR16 790 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 TRIM60Q495X7 471 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 ARSIQ5FYB1 569 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 PLPP4Q5VZY2 271 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 ZNF554Q86TJ5 538 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 TICAM1Q8IUC6 712 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 LEMD2Q8NC56 503 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 IGSF21Q96ID5 467 aa15.48■□□□□ 0.07
SMAD6-201ENST00000288840 HMG20AQ9NP66 347 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms