RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 USH1CQ9Y6N9 552 aa18.33■□□□□ 0.53
PDLIM3-202ENST00000284770 TDRD6O60522 2096 aaKnown RBP18.33■□□□□ 0.52
PDLIM3-202ENST00000284770 ZNF318Q5VUA4 2279 aa18.33■□□□□ 0.52
PDLIM3-202ENST00000284770 A0A0G2JND7 137 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 A0A1B0GTQ1 180 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 ZNF839A8K0R7 811 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 B4DGG1 531 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 VIPP01282 170 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 RAB28P51157 221 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 UBE2IP63279 158 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 CAPN13Q6MZZ7 669 aaPredicted RBP18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 MAVSQ7Z434 540 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 SLC9B2Q86UD5 537 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 WDR75Q8IWA0 830 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 SLC25A45Q8N413 288 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 MED8Q96G25 268 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 PLCD4Q9BRC7 762 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 SIKE1Q9BRV8 207 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 LRFN3Q9BTN0 628 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 TMEM120AQ9BXJ8 343 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 SHCBP1LQ9BZQ2 653 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 NOL11Q9H8H0 719 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 DNAJC11Q9NVH1 559 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 CACNA1EQ15878 2313 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 KATNA1O75449 491 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 MPLP40238 635 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 RPL14P50914 215 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 ARFIP2P53365 341 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 TBPL1P62380 186 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 SH3BP2P78314 561 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 DNAH14Q0VDD8 3507 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 FASTKQ14296 549 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 DEFB133Q30KQ1 61 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 CUZD1Q86UP6 607 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 THOC6Q86W42 341 aaKnown RBP18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 MAPK15Q8TD08 544 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 NRTNQ99748 197 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 SGPP1Q9BX95 441 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 ARRDC1-AS1Q9H2J1 176 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 IPPKQ9H8X2 491 aa18.32■□□□□ 0.52
PDLIM3-202ENST00000284770 TP53BP1Q12888 1972 aaPredicted RBP18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 WDFY4Q6ZS81 3184 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 ARHGAP33O14559 1287 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 CCND1P24385 295 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 PKLRP30613 574 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 AQP5P55064 265 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 RBBP7Q16576 425 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 OGFOD3Q6PK18 319 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 LMNTD1Q8N9Z9 388 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 HMGCLL1Q8TB92 370 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 AGAP11Q8TF27 550 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 ZNF382Q96SR6 550 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 GAREM1Q9H706 876 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 TNFRSF12AQ9NP84 129 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 MID1IP1Q9NPA3 183 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 CCDC177Q9NQR7 707 aaPredicted RBP18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 ICKQ9UPZ9 632 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 STK38LQ9Y2H1 464 aa18.31■□□□□ 0.52
PDLIM3-202ENST00000284770 ARHGEF17Q96PE2 2063 aaPredicted RBP18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 MATN2O00339 956 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 OR7A17O14581 309 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 YKT6O15498 198 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 NOBOXO60393 691 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 OTCP00480 354 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 SYPP08247 313 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 EPORP19235 508 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 EPHA8P29322 1005 aaPredicted RBP18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 HK2P52789 917 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 SUSD1Q6UWL2 747 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 C17orf82Q86X59 251 aaPredicted RBP18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 RBM12BQ8IXT5 1001 aaKnown RBP18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 SNX31Q8N9S9 440 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 LINC01555Q8NAE3 123 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 AVL9Q8NBF6 648 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 OR52B6Q8NGF0 335 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 OR2L8Q8NGY9 312 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 AGR3Q8TD06 166 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 LCN9Q8WX39 176 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 SMPDL3AQ92484 453 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 ATP6V1E2Q96A05 226 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 OR4K3Q96R72 315 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 PRRX2Q99811 253 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 XKR8Q9H6D3 395 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 A0A1B0GTL3 188 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 GIPC1O14908 333 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 ESRRBO95718 433 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 PRDX3P30048 256 aaKnown RBP18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 SHMT2P34897 504 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 PI4KAP42356 2102 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 CCNG1P51959 295 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 PKNOX1P55347 436 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 HHEXQ03014 270 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 CDC16Q13042 620 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 IFT88Q13099 833 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 GPR18Q14330 331 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 SH2D4BQ5SQS7 431 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 ARL14Q8N4G2 192 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 SETD7Q8WTS6 366 aaKnown RBP18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 MIPEPQ99797 713 aa18.3■□□□□ 0.52
PDLIM3-202ENST00000284770 NTMT1Q9BV86 223 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms