RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TIGD6Q17RP2 521 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 FAM171A1Q5VUB5 890 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 NXNL2Q5VZ03 156 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 OR2T5Q6IEZ7 315 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 PDE12Q6L8Q7 609 aaKnown RBP12.6□□□□□ -0.39
COL8A1-202ENST00000273342 GPR142Q7Z601 462 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 GPR149Q86SP6 731 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 UBE2J2Q8N2K1 259 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 OR2T29Q8NH02 315 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 TRIB2Q92519 343 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 APOL4Q9BPW4 351 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 CENPOQ9BU64 300 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 BOCQ9BWV1 1114 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 PARVBQ9HBI1 364 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 POPDC3Q9HBV1 291 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-202ENST00000273342 NLE1Q9NVX2 485 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-202ENST00000273342 TMEM248Q9NWD8 314 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 RNF6Q9Y252 685 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 WDR90Q96KV7 1748 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 LOC730098B7Z3J9 87 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 TNFRSF10BO14763 440 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 RGS5O15539 181 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 HOXA9P31269 272 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 KCNQ1P51787 676 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF140P52738 457 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF648Q5T619 568 aaPredicted RBP12.6□□□□□ -0.39
COL8A1-202ENST00000273342 CACHD1Q5VU97 1274 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 C9orf131Q5VYM1 1079 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 AFTPHQ6ULP2 937 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 LRRC49Q8IUZ0 686 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 BHMTQ93088 406 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 TXNDC15Q96J42 360 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 ZFYVE19Q96K21 471 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 CCDC115Q96NT0 180 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 CIPCQ9C0C6 399 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 ABHD16BQ9H3Z7 469 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 CPNE5Q9HCH3 593 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 GPR83Q9NYM4 423 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 WWOXQ9NZC7 414 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 MICAL3Q7RTP6 2002 aa12.6□□□□□ -0.39
COL8A1-202ENST00000273342 CBX4O00257 560 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 CTDSP2O14595 271 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 TLL1O43897 1013 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 WBP4O75554 376 aaKnown RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 PRAMEF12O95522 483 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 BCKDHAP12694 445 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 POU2F1P14859 743 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 GNPDA1P46926 289 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 TWF1Q12792 350 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 ARHGEF7Q14155 803 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 SF1Q15637 639 aaKnown RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 CYP27C1Q4G0S4 372 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 TCAIMQ8N3R3 496 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 CLSTN3Q9BQT9 956 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 TTYH2Q9BSA4 534 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 TTPALQ9BTX7 342 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 ITPAQ9BY32 194 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 RERGLQ9H628 205 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 LRTM1Q9HBL6 345 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 PLSCR3Q9NRY6 295 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 ADPRHL2Q9NX46 363 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 PPP2R3BQ9Y5P8 575 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 OR2A25A4D2G3 310 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 M0R082 166 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 DSCR3O14972 297 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 CPSF4O95639 269 aaKnown RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 OTCP00480 354 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 ACVR2AP27037 513 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 S100A3P33764 101 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 GRK3P35626 688 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 IL10RBQ08334 325 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 PLEKHG6Q3KR16 790 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 PTRHD1Q6GMV3 140 aaKnown RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 OR4F3Q6IEY1 312 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 SHQ1Q6PI26 577 aaKnown RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 OR6K2Q8NGY2 324 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 PPP3R2Q96LZ3 170 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 NEDD4LQ96PU5 975 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 CDK5RAP1Q96SZ6 601 aaKnown RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 CINPQ9BW66 212 aaPredicted RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 EBPLQ9BY08 206 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 LATS2Q9NRM7 1088 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 TLR6Q9Y2C9 796 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 N6AMT1Q9Y5N5 214 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 C17orf102A2RUQ5 167 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 PABPN1LA6NDY0 278 aaKnown RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 RGS14O43566 566 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 STSP08842 583 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 HOXB8P17481 243 aaPredicted RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 SLC19A1P41440 591 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 RPS24P62847 133 aaKnown RBP12.59□□□□□ -0.39
COL8A1-202ENST00000273342 FAM151BQ6UXP7 276 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 ZNF621Q6ZSS3 439 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 FAM217AQ8IXS0 508 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 THEM5Q8N1Q8 247 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 TEX26Q8N6G2 289 aa12.59□□□□□ -0.39
COL8A1-202ENST00000273342 UTP15Q8TED0 518 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms