RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 IGLON5A6NGN9 336 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 CCDC85CA6NKD9 419 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 H0YJX3 145 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 CLGNO14967 610 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 SEC22BO75396 215 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 POP7O75817 140 aaKnown RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 STAMBPO95630 424 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 ZNF8P17098 575 aaPredicted RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 JAK1P23458 1154 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 ZFP36L2P47974 494 aaKnown RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 SOX9P48436 509 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 TAS2R38P59533 333 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 RPL38P63173 70 aaKnown RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 THOC6Q86W42 341 aaKnown RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 FAM9CQ8IZT9 166 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 OR2T3Q8NH03 318 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 HM13Q8TCT9 377 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 ABHD8Q96I13 439 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 MSLNLQ96KJ4 702 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 FBRSQ9HAH7 460 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 ABCD2Q9UBJ2 740 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 AP4B1Q9Y6B7 739 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 SZT2Q5T011 3432 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 PRORSD1PA6NEY8 169 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 RSL1D1O76021 490 aaKnown RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 TNFAIP8O95379 198 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 C1orf105O95561 183 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 PDYNP01213 254 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 C8BP07358 591 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 JUPP14923 745 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 TCN1P20061 433 aaPredicted RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 ITPKAP23677 461 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 PRPH2P23942 346 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 NTSR1P30989 418 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 HALP42357 657 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 RPL5P46777 297 aaKnown RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 SLC7A2P52569 658 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 IRF8Q02556 426 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 CHIT1Q13231 466 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 STARD3Q14849 445 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 AP1ARQ63HQ0 302 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 PRR23BQ6ZRT6 265 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 TRMT11Q7Z4G4 463 aaKnown RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 ZNF547Q8IVP9 402 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 GLB1L3Q8NCI6 653 aaPredicted RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 ERLEC1Q96DZ1 483 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 PKP2Q99959 881 aa14.88□□□□□ -0.03
SF3B4-201ENST00000271628 INTS7Q9NVH2 962 aaKnown RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 POLR3HQ9Y535 204 aaPredicted RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 DNMT3AQ9Y6K1 912 aaPredicted RBP14.88□□□□□ -0.03
SF3B4-201ENST00000271628 KCNE1BA0A087WTH5 132 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 ANHXE9PGG2 379 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 NPIPB8E9PQR5 432 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 RNASEH2AO75792 299 aaKnown RBP14.87□□□□□ -0.03
SF3B4-201ENST00000271628 CLPTM1O96005 669 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 TEAD1P28347 426 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 SEC13P55735 322 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 HMGCS1Q01581 520 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 RHDQ02161 417 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 PCDH1Q08174 1060 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 RPA4Q13156 261 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 NAE1Q13564 534 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 HTR4Q13639 388 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 NFYCQ13952 458 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 SGO1Q5FBB7 561 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 HEATR4Q86WZ0 1026 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 TMEM102Q8N9M5 508 aaPredicted RBP14.87□□□□□ -0.03
SF3B4-201ENST00000271628 PLA2G15Q8NCC3 412 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 OR56A3Q8NH54 315 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 VPS33AQ96AX1 596 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 DGCR14Q96DF8 476 aaKnown RBP14.87□□□□□ -0.03
SF3B4-201ENST00000271628 MTFMTQ96DP5 389 aaKnown RBP14.87□□□□□ -0.03
SF3B4-201ENST00000271628 PKP4Q99569 1192 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 ZBTB18Q99592 522 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 ZNF696Q9H7X3 374 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 TMED5Q9Y3A6 229 aa14.87□□□□□ -0.03
SF3B4-201ENST00000271628 A0A1W2PP55 124 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 KLHL33A6NCF5 533 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 GPR89AB7ZAQ6 455 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 C9JVG2 144 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 ANKRD28O15084 1053 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 SLC16A8O95907 504 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 GPR89BP0CG08 455 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 SMIM18P0DKX4 95 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 IMPA1P29218 277 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 IL12AP29459 219 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 LTBRP36941 435 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 HNF4AP41235 474 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 FRG2Q64ET8 278 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 MED8Q96G25 268 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 DUS3LQ96G46 650 aaKnown RBP14.86□□□□□ -0.03
SF3B4-201ENST00000271628 FRG2BQ96QU4 278 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 GABRG3Q99928 467 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 ACPTQ9BZG2 426 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 IL1RL2Q9HB29 575 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 UBAP1Q9NZ09 502 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 AP4S1Q9Y587 144 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 TICRRQ7Z2Z1 1910 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 FXYD1O00168 92 aa14.86□□□□□ -0.03
SF3B4-201ENST00000271628 DNTTP04053 509 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms