RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 PTPN5P54829 565 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 SUZ12Q15022 739 aaKnown RBP13.39□□□□□ -0.27
NPC1-201ENST00000269228 ABHD13Q7L211 337 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 OSBPL11Q9BXB4 747 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 PRRG4Q9BZD6 226 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 MCOLN1Q9GZU1 580 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 MTG2Q9H4K7 406 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 CDH7Q9ULB5 785 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 DHRS7Q9Y394 339 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 CEBPBP17676 345 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 TCEA1P23193 301 aaKnown RBP13.39□□□□□ -0.27
NPC1-201ENST00000269228 MPIP34949 423 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 GSCP56915 257 aaPredicted RBP13.39□□□□□ -0.27
NPC1-201ENST00000269228 BTN3A2P78410 334 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 RPL6Q02878 288 aaKnown RBP13.39□□□□□ -0.27
NPC1-201ENST00000269228 LRRC26Q2I0M4 334 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 TMIGD1Q6UXZ0 262 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 FAM220AQ7Z4H9 259 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 SFRP1Q8N474 314 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 TRAM1L1Q8N609 369 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 SETD7Q8WTS6 366 aaKnown RBP13.39□□□□□ -0.27
NPC1-201ENST00000269228 MUC13Q9H3R2 512 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 ZC4H2Q9NQZ6 224 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 ZNF282Q9UDV7 671 aaPredicted RBP13.39□□□□□ -0.27
NPC1-201ENST00000269228 RNF11Q9Y3C5 154 aa13.39□□□□□ -0.27
NPC1-201ENST00000269228 TNFRSF11BO00300 401 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 MAN2B1O00754 1011 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 HOXB6P17509 224 aaKnown RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 CSNK2A2P19784 350 aaPredicted RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 PTX3P26022 381 aaPredicted RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 FOLH1Q04609 750 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 SIM2Q14190 667 aaPredicted RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 SLC8B1Q6J4K2 584 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 PSAPL1Q6NUJ1 521 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 NCEH1Q6PIU2 408 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 SLC9B2Q86UD5 537 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 CHST14Q8NCH0 376 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 TSPAN14Q8NG11 270 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 SLC5A11Q8WWX8 675 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 MYDGFQ969H8 173 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 ZNF778Q96MU6 729 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 OR51B5Q9H339 312 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 SERHL2Q9H4I8 314 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 SERHLQ9NQF3 203 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 ERGIC3Q9Y282 383 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 A8MUA0 341 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 PLK4O00444 970 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 MANBAO00462 879 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 WFS1O76024 890 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 UBXN7O94888 489 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 MYCLP1P12525 358 aaPredicted RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 CTSKP43235 329 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 BROXQ5VW32 411 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 RTL4Q6ZR62 310 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 NEK10Q6ZWH5 1172 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 CCDC103Q8IW40 242 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 AVL9Q8NBF6 648 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 XKR8Q9H6D3 395 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 CALML5Q9NZT1 146 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 PCDHB11Q9Y5F2 797 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 SMIM31A0A1B0GVY4 71 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 CXCR6O00574 342 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 LEPRP48357 1165 aaKnown RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 SEPHS1P49903 392 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 TRIM25Q14258 630 aaKnown RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 CST6Q15828 149 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 PRRT3Q5FWE3 981 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 PLEKHS1Q5SXH7 462 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 ALKBH2Q6NS38 261 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 OR2M4Q96R27 311 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 KCNA7Q96RP8 456 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 CDCA3Q99618 268 aaPredicted RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 FAM83CQ9BQN1 747 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 SLC29A3Q9BZD2 475 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 CXCL16Q9H2A7 254 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 SPATA6Q9NWH7 488 aaPredicted RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 MARCH4Q9P2E8 410 aaPredicted RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 MKL2Q9ULH7 1088 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 CDC14AQ9UNH5 594 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 hCG_2039718K7EN88 272 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 TP73O15350 636 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 DNAJA2O60884 412 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 CCNA2P20248 432 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 CD247P20963 164 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 TMED10P49755 219 aaKnown RBP13.38□□□□□ -0.27
NPC1-201ENST00000269228 SPIN4Q56A73 249 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 ARMCX4Q5H9R4 360 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 FAM110BQ8TC76 370 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 YIPF4Q9BSR8 244 aa13.38□□□□□ -0.27
NPC1-201ENST00000269228 SRCP12931 536 aa13.37□□□□□ -0.27
NPC1-201ENST00000269228 IL7RP16871 459 aa13.37□□□□□ -0.27
NPC1-201ENST00000269228 ZNF24P17028 368 aa13.37□□□□□ -0.27
NPC1-201ENST00000269228 IL12BP29460 328 aa13.37□□□□□ -0.27
NPC1-201ENST00000269228 AGTR2P50052 363 aa13.37□□□□□ -0.27
NPC1-201ENST00000269228 DGKQP52824 942 aa13.37□□□□□ -0.27
NPC1-201ENST00000269228 SP140Q13342 867 aa13.37□□□□□ -0.27
NPC1-201ENST00000269228 SLC44A4Q53GD3 710 aa13.37□□□□□ -0.27
NPC1-201ENST00000269228 LACTB2Q53H82 288 aaPredicted RBP13.37□□□□□ -0.27
NPC1-201ENST00000269228 TOR1AIP1Q5JTV8 583 aa13.37□□□□□ -0.27
NPC1-201ENST00000269228 TMC8Q8IU68 726 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms