RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 C3orf33Q6P1S2 294 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 OR7G2Q8NG99 324 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 NR4A3Q92570 626 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 ERLEC1Q96DZ1 483 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 LRRC3Q9BY71 257 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 FETUBQ9UGM5 382 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 SPIN1Q9Y657 262 aaPredicted RBP11.86□□□□□ -0.51
SRRM4-201ENST00000267260 COL1A2P08123 1366 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 HERV-K104P61576 105 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 MERTKQ12866 999 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 SLC22A17Q8WUG5 538 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 USP29Q9HBJ7 922 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 TAS2R10Q9NYW0 307 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 RUVBL1Q9Y265 456 aaKnown RBP11.86□□□□□ -0.51
SRRM4-201ENST00000267260 KCNU1A8MYU2 1149 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 AP2A1O95782 977 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 ANXA8P13928 327 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 CYP3A5P20815 502 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 MPSTP25325 297 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 BCL2A1Q16548 175 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF181Q2M3W8 571 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 TEX44Q53QW1 395 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 SH3D19Q5HYK7 790 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 GPAT4Q86UL3 456 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 TMEM199Q8N511 208 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 TMEM45AQ9NWC5 275 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF446Q9NWS9 450 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 P2RX2Q9UBL9 471 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 TEX13DA0A0J9YY54 714 aaPredicted RBP11.86□□□□□ -0.51
SRRM4-201ENST00000267260 HSPB3Q12988 150 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 GPR139Q6DWJ6 353 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF676Q8N7Q3 588 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 TERB2Q8NHR7 220 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 APOLD1Q96LR9 279 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 RAD9AQ99638 391 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 PIK3C2BO00750 1634 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 DEPDC5O75140 1603 aa11.86□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3DA0A087WVF3 549 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3IA0A087WXS9 549 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3EA0A087X179 549 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3KA0A087X1G2 549 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 A0A0J9YVX5 310 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3FA6NER0 549 aaPredicted RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3LB9A6J9 549 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 APODP05090 189 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3HP0C7X1 549 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PRKCHP24723 683 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3GQ6DHY5 549 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3CQ6IPX1 549 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TBC1D3Q8IZP1 549 aaPredicted RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PRELID2Q8N945 189 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 SMARCD2Q92925 531 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 GAD1Q99259 594 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 CDT1Q9H211 546 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 IQSEC2Q5JU85 1478 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 FAM234BA2RU67 622 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 GMFGO60234 142 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TGM6O95932 706 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF45Q02386 682 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 SSX2Q16385 188 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF101Q8IZC7 436 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 SLC22A15Q8IZD6 547 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PHTF2Q8N3S3 785 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 ACO2Q99798 780 aaKnown RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 DUSP9Q99956 384 aaKnown RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 NUSAP1Q9BXS6 441 aaKnown RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 HMX1Q9NP08 348 aaPredicted RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 SCDO00767 359 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 SLC6A9P48067 706 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 SPIN4Q56A73 249 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 NOMO2Q5JPE7 1267 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 KCTD9Q7L273 389 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 FCAMRQ8WWV6 532 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 BORCS7Q96B45 105 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PIWIL1Q96J94 861 aaKnown RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 ZNF358Q9NW07 568 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PAGE1O75459 146 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 GKN3PP0CG01 181 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 AGTR1P30556 359 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 FMO3P31513 532 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 EPHX2P34913 555 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 MPP1Q00013 466 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 ZC3HC1Q86WB0 502 aaKnown RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 SPATA6LQ8N4H0 392 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TOP6BLQ8N6T0 577 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PACRGLQ8N7B6 248 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PROKR2Q8NFJ6 384 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 OR10A6Q8NH74 314 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 WACQ9BTA9 647 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TUBB1Q9H4B7 451 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 RETREG1Q9H6L5 497 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 TESMINQ9Y4I5 508 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PRR36Q9H6K5 1346 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PAPSS1O43252 624 aaPredicted RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 RASGRP1O95267 797 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 FARS2O95363 451 aaKnown RBP11.85□□□□□ -0.51
SRRM4-201ENST00000267260 ITGA5P08648 1049 aa11.85□□□□□ -0.51
SRRM4-201ENST00000267260 PKMP14618 531 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms