RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TRNT1Q96Q11 434 aaKnown RBP16.72■□□□□ 0.27
SRF-201ENST00000265354 SLC2A13Q96QE2 648 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 ZDHHC6Q9H6R6 413 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 CACNA1CQ13936 2221 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 OR6C70A6NIJ9 312 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 H0YAE9 185 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 SOX14O95416 240 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 PUDPQ08623 228 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 HIST2H2ACQ16777 129 aaPredicted RBP16.72■□□□□ 0.27
SRF-201ENST00000265354 PKDCCQ504Y2 493 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 HIST2H2AA3Q6FI13 130 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 SYCE2Q6PIF2 218 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 BTLAQ7Z6A9 289 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 RBFAQ8N0V3 343 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 DTX3Q8N9I9 347 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 IGSF8Q969P0 613 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 PYURFQ96I23 114 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 NUSAP1Q9BXS6 441 aaKnown RBP16.72■□□□□ 0.27
SRF-201ENST00000265354 SIAEQ9HAT2 523 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 THUMPD1Q9NXG2 353 aaKnown RBP16.72■□□□□ 0.27
SRF-201ENST00000265354 SAGE2PA6NJ88 616 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 MAGEB17A8MXT2 336 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 C1QAP02745 245 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 ERVPABLB-1P60509 514 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 SMAD3P84022 425 aaKnown RBP16.72■□□□□ 0.27
SRF-201ENST00000265354 ZXDBP98169 803 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 TSTQ16762 297 aaKnown RBP16.72■□□□□ 0.27
SRF-201ENST00000265354 ATAD3BQ5T9A4 648 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 UBE2FQ969M7 185 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 SSR3Q9UNL2 185 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 PCDHGA11Q9Y5H2 935 aa16.72■□□□□ 0.27
SRF-201ENST00000265354 C9P02748 559 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 ITGB1P05556 798 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 PABPC1P11940 636 aaKnown RBP16.71■□□□□ 0.27
SRF-201ENST00000265354 FEN1P39748 380 aaKnown RBP16.71■□□□□ 0.27
SRF-201ENST00000265354 NFKB2Q00653 900 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.71■□□□□ 0.27
SRF-201ENST00000265354 GALNT12Q8IXK2 581 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 FAM86B1Q8N7N1 296 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 OR4A15Q8NGL6 344 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 ZNF641Q96N77 438 aaPredicted RBP16.71■□□□□ 0.27
SRF-201ENST00000265354 ZNF599Q96NL3 588 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 STSP08842 583 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 CKMT1AP12532 417 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 RPL9P32969 192 aaKnown RBP16.71■□□□□ 0.27
SRF-201ENST00000265354 GNG2P59768 71 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 RPP38P78345 283 aaKnown RBP16.71■□□□□ 0.27
SRF-201ENST00000265354 EMX1Q04741 257 aaPredicted RBP16.71■□□□□ 0.27
SRF-201ENST00000265354 KLHL12Q53G59 568 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 AKIRIN2Q53H80 203 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 PLEKHG7Q6ZR37 379 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 RGL4Q8IZJ4 473 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 MFSD2AQ8NA29 543 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 ZMIZ2Q8NF64 920 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 MRPL9Q9BYD2 267 aaKnown RBP16.71■□□□□ 0.27
SRF-201ENST00000265354 ZBTB20Q9HC78 741 aaPredicted RBP16.71■□□□□ 0.27
SRF-201ENST00000265354 MOV10Q9HCE1 1003 aaKnown RBP16.71■□□□□ 0.27
SRF-201ENST00000265354 PCDHB7Q9Y5E2 793 aa16.71■□□□□ 0.27
SRF-201ENST00000265354 CASKO14936 926 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 IFNA14P01570 189 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 ANXA4P09525 319 aaPredicted RBP16.71■□□□□ 0.26
SRF-201ENST00000265354 CRHBPP24387 322 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 HTR1EP28566 365 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 IL10RBQ08334 325 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 CNTN1Q12860 1018 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 LETMD1Q6P1Q0 360 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 Q6ZPB1 254 aaPredicted RBP16.71■□□□□ 0.26
SRF-201ENST00000265354 SPATC1Q76KD6 591 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 NETO1Q8TDF5 533 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 TMEM246Q9BRR3 403 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 SLC22A14Q9Y267 594 aa16.71■□□□□ 0.26
SRF-201ENST00000265354 A0A096LPI6 279 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 SBK3P0C264 359 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 C21orf33P30042 268 aaPredicted RBP16.7■□□□□ 0.26
SRF-201ENST00000265354 TALDO1P37837 337 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 ZNF280AP59817 542 aaPredicted RBP16.7■□□□□ 0.26
SRF-201ENST00000265354 MS4A13Q5J8X5 152 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 PKP4Q99569 1192 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 ARPC5LQ9BPX5 153 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 POLR2J2Q9GZM3 115 aaKnown RBP16.7■□□□□ 0.26
SRF-201ENST00000265354 TRIM45Q9H8W5 580 aaPredicted RBP16.7■□□□□ 0.26
SRF-201ENST00000265354 PAQR5Q9NXK6 330 aaPredicted RBP16.7■□□□□ 0.26
SRF-201ENST00000265354 ITGBL1O95965 494 aaPredicted RBP16.7■□□□□ 0.26
SRF-201ENST00000265354 DCTP40126 519 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 GSTM5P46439 218 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 PARP15Q460N3 678 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 ANKS3Q6ZW76 656 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 OR13J1Q8NGT2 312 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 IMP4Q96G21 291 aaKnown RBP16.7■□□□□ 0.26
SRF-201ENST00000265354 IL12RB2Q99665 862 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 ITPAQ9BY32 194 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 DSN1Q9H410 356 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 DNMT3LQ9UJW3 386 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 NME7Q9Y5B8 376 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 ARID1AO14497 2285 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 GSAPA4D1B5 854 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 GSTM2P28161 218 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 IDUAP35475 653 aa16.7■□□□□ 0.26
SRF-201ENST00000265354 ARCN1P48444 511 aaKnown RBP16.7■□□□□ 0.26
SRF-201ENST00000265354 GPC2Q8N158 579 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms